RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ICOSQ9Y6W8 199 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 TMEM56-RWDD3S4R434 201 aa7.89□□□□□ -1.15
SDCBP-211ENST00000523441 TRGV1A0A0A0MS02 117 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-211ENST00000523441 H3BNG1 76 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 PAX4O43316 350 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 PSCAO43653 123 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
SDCBP-211ENST00000523441 CXCL3P19876 107 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 GPR107Q5VW38 600 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 STEAP1BQ6NZ63 245 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 THAP8Q8NA92 274 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 OR4D5Q8NGN0 318 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 GPR82Q96P67 336 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 GSN-AS1Q9NRJ2 163 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 MSRB1Q9NZV6 116 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 LY96Q9Y6Y9 160 aa7.88□□□□□ -1.15
SDCBP-211ENST00000523441 TRAV9-2A0A087WT02 112 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 CRYM-AS1A6NIL9 109 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 H3BRN7 92 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 AKR1C4P17516 323 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 ANXA7P20073 488 aaKnown RBP7.87□□□□□ -1.15
SDCBP-211ENST00000523441 CCR6P51684 374 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 TAS2R19P59542 299 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 RAP2BP61225 183 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 NCS1P62166 190 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 EXTL2Q9UBQ6 330 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 MTFP1Q9UDX5 166 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 HIGD1AQ9Y241 93 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 DNAH8Q96JB1 4490 aa7.87□□□□□ -1.15
SDCBP-211ENST00000523441 LRP1Q07954 4544 aaKnown RBP7.86□□□□□ -1.15
SDCBP-211ENST00000523441 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 CFDP00746 253 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-211ENST00000523441 RPL7P18124 248 aaKnown RBP7.86□□□□□ -1.15
SDCBP-211ENST00000523441 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 TMEM229BQ8NBD8 167 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 C8orf49Q96NF6 230 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 TMEM70Q9BUB7 260 aa7.86□□□□□ -1.15
SDCBP-211ENST00000523441 DISC1C4P0D8 188 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 H3BP45 60 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 WRBO00258 174 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 PRAF2O60831 178 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 IL5P05113 134 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 TBPP20226 339 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 VBP1P61758 197 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 ACOT7LQ6ZUV0 252 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 SHANK2-AS3Q9BTD1 123 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 SLC45A2Q9UMX9 530 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 KCNIP3Q9Y2W7 256 aa7.85□□□□□ -1.15
SDCBP-211ENST00000523441 LINC00854A0A1B0GVQ3 168 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 PMS2P5A8MQ11 134 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 E5RGE8 158 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 HYPMO75409 117 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 LINC00869P0C866 280 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 EVI2AP22794 236 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 S100A7P31151 101 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 SPANXN5Q5MJ07 72 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 DEFB104AQ8WTQ1 72 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 LINC00467Q9BRT7 94 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 Q9H521 79 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 Q9HAA7 133 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.15
SDCBP-211ENST00000523441 CACFD1Q9UGQ2 172 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 GPR132Q9UNW8 380 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 KLF12Q9Y4X4 402 aa7.84□□□□□ -1.15
SDCBP-211ENST00000523441 ZNF324O75467 553 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-211ENST00000523441 CRYGDP07320 174 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 MZT2AQ6P582 158 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 CYP2G1PQ6ZSU1 146 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 OR51S1Q8NGJ8 323 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 C20orf144Q9BQM9 153 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 ARL6Q9H0F7 186 aa7.83□□□□□ -1.16
SDCBP-211ENST00000523441 A0A0B4J2A0 478 aa7.82□□□□□ -1.16
SDCBP-211ENST00000523441 SLC17A3O00476 420 aa7.82□□□□□ -1.16
SDCBP-211ENST00000523441 CT45A10P0DMU9 189 aa7.82□□□□□ -1.16
SDCBP-211ENST00000523441 LEPP41159 167 aa7.82□□□□□ -1.16
SDCBP-211ENST00000523441 ATP5IP56385 69 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-211ENST00000523441 RRAS2P62070 204 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-211ENST00000523441 DAZ2Q13117 558 aaKnown RBP7.82□□□□□ -1.16
SDCBP-211ENST00000523441 CLVS1Q8IUQ0 354 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-211ENST00000523441 SHPKQ9UHJ6 478 aa7.82□□□□□ -1.16
SDCBP-211ENST00000523441 A0A087X0K7 114 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 SURF2Q15527 256 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-211ENST00000523441 MRPL23Q16540 153 aaKnown RBP7.81□□□□□ -1.16
SDCBP-211ENST00000523441 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 Q8N814 137 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 ZBTB8BQ8NAP8 495 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-211ENST00000523441 ZNF431Q8TF32 576 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-211ENST00000523441 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 MCUBQ9NWR8 336 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 HHLA3Q9XRX5 114 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
SDCBP-211ENST00000523441 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 PRSS46E5RG02 174 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 AKAIN1P0CW23 69 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms