RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TEX48A0A1B0GUV7 120 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 FAM24AA6NFZ4 105 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 INSP01308 110 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 P0DMU3 169 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 FAM231AP0DMU4 169 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 FAM231CP0DMU5 169 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 CAV2P51636 162 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 RHOBP62745 196 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 S100A7AQ86SG5 101 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 C12orf45Q8N5I9 185 aaPredicted RBP14.72□□□□□ -0.05
SDCBP-209ENST00000522243 POM121L12Q8N7R1 296 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 OR8A1Q8NGG7 326 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 GGACTQ9BVM4 153 aa14.72□□□□□ -0.05
SDCBP-209ENST00000522243 BOLA2-SMG1P6H3BVE0 249 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 CST7O76096 145 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 H2AFB2P0C5Z0 115 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 PXDC1Q5TGL8 231 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 C2orf50Q96LR7 162 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 PPP1R14DQ9NXH3 145 aa14.71□□□□□ -0.05
SDCBP-209ENST00000522243 H3BTX0 84 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 COX7A2P2O60397 106 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 DAD1P61803 113 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 MORN5Q5VZ52 161 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 TMEM37Q8WXS4 190 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 CCDC32Q9BV29 185 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 C11orf1Q9H5F2 150 aa14.7□□□□□ -0.06
SDCBP-209ENST00000522243 FRAS1Q86XX4 4008 aa14.69□□□□□ -0.06
SDCBP-209ENST00000522243 OXA1LQ15070 435 aa14.69□□□□□ -0.06
SDCBP-209ENST00000522243 RPUSD4Q96CM3 377 aaKnown RBP14.69□□□□□ -0.06
SDCBP-209ENST00000522243 RNF24Q9Y225 148 aa14.69□□□□□ -0.06
SDCBP-209ENST00000522243 FAM240BA0A1B0GVZ2 78 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 M0R2N4 97 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 AZU1P20160 251 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 CAMLGP49069 296 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 S100A10P60903 97 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 C10orf113Q5VZT2 155 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 MIC13Q5XKP0 118 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 LCN15Q6UWW0 184 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 NRARPQ7Z6K4 114 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 LINC01587Q99440 93 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 ZNF331Q9NQX6 463 aaPredicted RBP14.68□□□□□ -0.06
SDCBP-209ENST00000522243 DNAH10Q8IVF4 4471 aa14.68□□□□□ -0.06
SDCBP-209ENST00000522243 OPCMLQ14982 345 aa14.67□□□□□ -0.06
SDCBP-209ENST00000522243 UBE2DNLQ8IWF7 75 aa14.67□□□□□ -0.06
SDCBP-209ENST00000522243 TRAV5A0A0B4J249 113 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 SLC17A3O00476 420 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 HTN1P15515 57 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 CXCL2P19875 107 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 PVALBP20472 110 aaPredicted RBP14.66□□□□□ -0.06
SDCBP-209ENST00000522243 B2MP61769 119 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 RAB31Q13636 194 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 RAB32Q13637 225 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 FCN2Q15485 313 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 TMEM88Q6PEY1 159 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 Q6ZRG5 221 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 FAM210BQ96KR6 192 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 SLC50A1Q9BRV3 221 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 UQCC1Q9NVA1 299 aa14.66□□□□□ -0.06
SDCBP-209ENST00000522243 UBE2L5PA0A1B0GUS4 154 aa14.65□□□□□ -0.06
SDCBP-209ENST00000522243 IGSF23A1L1A6 192 aa14.65□□□□□ -0.06
SDCBP-209ENST00000522243 PARD6GQ9BYG4 376 aaPredicted RBP14.65□□□□□ -0.06
SDCBP-209ENST00000522243 DNAJC4Q9NNZ3 241 aa14.65□□□□□ -0.06
SDCBP-209ENST00000522243 WDR83OSQ9Y284 106 aa14.65□□□□□ -0.06
SDCBP-209ENST00000522243 PRAC2D3DTV9 90 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 H3BQ15 152 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 DEFB130BP0DP73 79 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 DEFB130AP0DP74 79 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 BAXQ07812 192 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 IL15RAQ13261 267 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 KIR3DS1Q14943 382 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 MZT2BQ6NZ67 158 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 TMEM252Q8N6L7 170 aa14.64□□□□□ -0.07
SDCBP-209ENST00000522243 DNAH6Q9C0G6 4158 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 IGLV2-18A0A075B6J9 118 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 PLAC8L1A1L4L8 177 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 LYRM9A8MSI8 78 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 IGLC2P0DOY2 106 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 TSPOP30536 169 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 CDKN1BP46527 198 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 SULT1A1P50225 295 aa14.63□□□□□ -0.07
SDCBP-209ENST00000522243 LYRM2Q9NU23 88 aaPredicted RBP14.63□□□□□ -0.07
SDCBP-209ENST00000522243 VWC2Q2TAL6 325 aa14.62□□□□□ -0.07
SDCBP-209ENST00000522243 TMEM256Q8N2U0 113 aa14.62□□□□□ -0.07
SDCBP-209ENST00000522243 OR1L4Q8NGR5 311 aa14.62□□□□□ -0.07
SDCBP-209ENST00000522243 SLC39A9Q9NUM3 307 aa14.62□□□□□ -0.07
SDCBP-209ENST00000522243 S100A11P31949 105 aa14.61□□□□□ -0.07
SDCBP-209ENST00000522243 TAS2R60P59551 318 aa14.61□□□□□ -0.07
SDCBP-209ENST00000522243 STX12Q86Y82 276 aa14.61□□□□□ -0.07
SDCBP-209ENST00000522243 S100ZQ8WXG8 99 aa14.61□□□□□ -0.07
SDCBP-209ENST00000522243 SAT2Q96F10 170 aaPredicted RBP14.61□□□□□ -0.07
SDCBP-209ENST00000522243 J3KRW8 73 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 SIX6O95475 246 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 FGF7P21781 194 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 RPL29P47914 159 aaKnown RBP14.6□□□□□ -0.07
SDCBP-209ENST00000522243 ASAH1Q13510 395 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 LINC00299Q6ZSB3 139 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 LINC00336Q6ZUF6 198 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 OR10J6PQ8NGY7 276 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 PFDN5Q99471 154 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms