RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MBD3L1Q8WWY6 194 aa18.08■□□□□ 0.48
PVT1-212ENST00000521951 MAP1LC3B2A6NCE7 125 aa18.07■□□□□ 0.48
PVT1-212ENST00000521951 CXorf1O96002 111 aa18.07■□□□□ 0.48
PVT1-212ENST00000521951 MEOX2P50222 304 aa18.07■□□□□ 0.48
PVT1-212ENST00000521951 MAP1LC3BQ9GZQ8 125 aa18.07■□□□□ 0.48
PVT1-212ENST00000521951 ZMAT5Q9UDW3 170 aaKnown RBP18.07■□□□□ 0.48
PVT1-212ENST00000521951 SOCS3O14543 225 aa18.06■□□□□ 0.48
PVT1-212ENST00000521951 NBEAP1P0C6P0 100 aa18.06■□□□□ 0.48
PVT1-212ENST00000521951 FGF8P55075 233 aaPredicted RBP18.06■□□□□ 0.48
PVT1-212ENST00000521951 UBE2L3P68036 154 aaKnown RBP18.06■□□□□ 0.48
PVT1-212ENST00000521951 GUK1Q16774 197 aa18.06■□□□□ 0.48
PVT1-212ENST00000521951 FAM24BQ8N5W8 94 aa18.06■□□□□ 0.48
PVT1-212ENST00000521951 BLNKQ8WV28 456 aa18.06■□□□□ 0.48
PVT1-212ENST00000521951 H2AFB1P0C5Y9 115 aa18.05■□□□□ 0.48
PVT1-212ENST00000521951 GCHFRP30047 84 aa18.05■□□□□ 0.48
PVT1-212ENST00000521951 ZNF680Q8NEM1 530 aa18.05■□□□□ 0.48
PVT1-212ENST00000521951 SFT2D1Q8WV19 159 aa18.05■□□□□ 0.48
PVT1-212ENST00000521951 SAT2Q96F10 170 aaPredicted RBP18.05■□□□□ 0.48
PVT1-212ENST00000521951 NOTCH1P46531 2555 aa18.05■□□□□ 0.48
PVT1-212ENST00000521951 TRBV19A0A075B6N1 114 aa18.04■□□□□ 0.48
PVT1-212ENST00000521951 LRRC20Q8TCA0 184 aa18.04■□□□□ 0.48
PVT1-212ENST00000521951 C16orf92Q96LL3 132 aa18.04■□□□□ 0.48
PVT1-212ENST00000521951 ZNF705EA8MWA4 302 aaPredicted RBP18.03■□□□□ 0.48
PVT1-212ENST00000521951 SLC17A3O00476 420 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 KPRPQ5T749 579 aaPredicted RBP18.03■□□□□ 0.48
PVT1-212ENST00000521951 PRR25Q96S07 402 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 TMPRSS5Q9H3S3 457 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 NBEAL1Q6ZS30 2694 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 TRAV8-2A0A0B4J237 113 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 NDUFB4O95168 129 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 CD7P09564 240 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 SAMD13Q5VXD3 122 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 IGFL4Q6B9Z1 124 aa18.03■□□□□ 0.48
PVT1-212ENST00000521951 ISLRO14498 428 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 IFNA7P01567 189 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 ID1P41134 155 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 PDE6HQ13956 83 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 IQCF2Q8IXL9 164 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 SUN5Q8TC36 379 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 SLC50A1Q9BRV3 221 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 ZNF331Q9NQX6 463 aaPredicted RBP18.02■□□□□ 0.47
PVT1-212ENST00000521951 TMEM167BQ9NRX6 74 aa18.02■□□□□ 0.47
PVT1-212ENST00000521951 A0A1B0GV50 99 aa18.01■□□□□ 0.47
PVT1-212ENST00000521951 ZNF253O75346 499 aa18.01■□□□□ 0.47
PVT1-212ENST00000521951 ZNF688P0C7X2 276 aa18.01■□□□□ 0.47
PVT1-212ENST00000521951 PSMB3P49720 205 aa18.01■□□□□ 0.47
PVT1-212ENST00000521951 CD81P60033 236 aa18.01■□□□□ 0.47
PVT1-212ENST00000521951 DNAH3Q8TD57 4116 aa18■□□□□ 0.47
PVT1-212ENST00000521951 SNRPD3P62318 126 aaKnown RBP18■□□□□ 0.47
PVT1-212ENST00000521951 ODF3L2Q3SX64 289 aa18■□□□□ 0.47
PVT1-212ENST00000521951 GTSCR1Q86UQ5 136 aa18■□□□□ 0.47
PVT1-212ENST00000521951 UBQLN2Q9UHD9 624 aa18■□□□□ 0.47
PVT1-212ENST00000521951 TRAV1-1A0A0B4J248 108 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 HLA-DMBP28068 263 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 BLOC1S1P78537 153 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 RNF182Q8N6D2 247 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 C20orf173Q96LM9 149 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 LINC00052Q96N35 136 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 MAP6D1Q9H9H5 199 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 C19orf73Q9NVV2 129 aa17.99■□□□□ 0.47
PVT1-212ENST00000521951 CMC4P56277 68 aaPredicted RBP17.98■□□□□ 0.47
PVT1-212ENST00000521951 RANP62826 216 aaKnown RBP17.98■□□□□ 0.47
PVT1-212ENST00000521951 PSG9Q00887 426 aa17.98■□□□□ 0.47
PVT1-212ENST00000521951 PSMG4Q5JS54 123 aa17.98■□□□□ 0.47
PVT1-212ENST00000521951 Q8N1Y9 231 aa17.98■□□□□ 0.47
PVT1-212ENST00000521951 DEFB131AP59861 70 aa17.98■□□□□ 0.47
PVT1-212ENST00000521951 IFITM2Q01629 132 aa17.98■□□□□ 0.47
PVT1-212ENST00000521951 OR11H12B2RN74 326 aa17.97■□□□□ 0.47
PVT1-212ENST00000521951 HBE1P02100 147 aa17.97■□□□□ 0.47
PVT1-212ENST00000521951 CCL20P78556 96 aa17.97■□□□□ 0.47
PVT1-212ENST00000521951 EXOC3-AS1Q8N2X6 119 aa17.97■□□□□ 0.47
PVT1-212ENST00000521951 FAM110AQ9BQ89 295 aa17.97■□□□□ 0.47
PVT1-212ENST00000521951 TEX46H3BTG2 121 aa17.96■□□□□ 0.47
PVT1-212ENST00000521951 PSG3Q16557 428 aa17.96■□□□□ 0.47
PVT1-212ENST00000521951 LYPD1Q8N2G4 141 aa17.96■□□□□ 0.47
PVT1-212ENST00000521951 ICAM4Q14773 271 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 APRG1Q8IVJ8 170 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 WFDC10AQ9H1F0 79 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 Q9H3A6 140 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 AAMDCQ9H7C9 122 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 CLEC5AQ9NY25 188 aa17.95■□□□□ 0.46
PVT1-212ENST00000521951 PRB2P02812 416 aaPredicted RBP17.94■□□□□ 0.46
PVT1-212ENST00000521951 ZNF124Q15973 351 aa17.94■□□□□ 0.46
PVT1-212ENST00000521951 PCNPQ8WW12 178 aaKnown RBP17.94■□□□□ 0.46
PVT1-212ENST00000521951 UBE2G2P60604 165 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 ZNF705FA8MVS1 300 aaPredicted RBP17.93■□□□□ 0.46
PVT1-212ENST00000521951 M0R3E3 92 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 DEFB1P60022 68 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 DEFB125Q8N687 156 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 ZNF738Q8NE65 137 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 LYPD6BQ8NI32 183 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 OTORQ9NRC9 128 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 AURKAIP1Q9NWT8 199 aaPredicted RBP17.93■□□□□ 0.46
PVT1-212ENST00000521951 PRELID1Q9Y255 219 aa17.93■□□□□ 0.46
PVT1-212ENST00000521951 YTHDF2Q9Y5A9 579 aaKnown RBP17.93■□□□□ 0.46
PVT1-212ENST00000521951 A0A1W2PRE2 83 aa17.92■□□□□ 0.46
PVT1-212ENST00000521951 PGPA6NDG6 321 aa17.92■□□□□ 0.46
PVT1-212ENST00000521951 PRB4P10163 310 aaPredicted RBP17.92■□□□□ 0.46
PVT1-212ENST00000521951 FAM74A7A6NL05 159 aa17.91■□□□□ 0.46
PVT1-212ENST00000521951 AGRNO00468 2067 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms