RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 HIST1H2BJP06899 126 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 SERPINB1P30740 379 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 S100A5P33763 92 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 HBBP68871 147 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 PSG9Q00887 426 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 KLRD1Q13241 179 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 FKBP1CQ5VVH2 108 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 C1orf140Q5VVS0 124 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 LYG2Q86SG7 212 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 STX12Q86Y82 276 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 PATE1Q8WXA2 126 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 POP5Q969H6 163 aaKnown RBP0.62□□□□□ -2.31
SKP1-207ENST00000520417 MUCL1Q96DR8 90 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 PCBD2Q9H0N5 130 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 IL20Q9NYY1 176 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 OR52A1Q9UKL2 312 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 TNFSF18Q9UNG2 199 aa0.62□□□□□ -2.31
SKP1-207ENST00000520417 MYO5AQ9Y4I1 1855 aaKnown RBP0.62□□□□□ -2.31
SKP1-207ENST00000520417 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
SKP1-207ENST00000520417 KIF1BO60333 1816 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 UNC13CQ8NB66 2214 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 TRAV27A0A087WT01 109 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 IGLV3-32A0A0A0MS00 114 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 TRBV6-4A0A1B0GX49 114 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 PFDN1O60925 122 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 CXCL8P10145 99 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 EIF3IQ13347 325 aaKnown RBP0.61□□□□□ -2.31
SKP1-207ENST00000520417 PATE2Q6UY27 113 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 LINC00322Q6ZN03 302 aaPredicted RBP0.61□□□□□ -2.31
SKP1-207ENST00000520417 ANGPTL5Q86XS5 388 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 LRRC18Q8N456 261 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 ISOC1Q96CN7 298 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 BORCS8Q96FH0 119 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 HYLS1Q96M11 299 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 LINC00052Q96N35 136 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 SELENOSQ9BQE4 189 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 CCDC32Q9BV29 185 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 WFDC10AQ9H1F0 79 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 NAT8BQ9UHF3 227 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 RNF11Q9Y3C5 154 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 NUBP2Q9Y5Y2 271 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 MYH7BA7E2Y1 1941 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 EML5Q05BV3 1969 aa0.61□□□□□ -2.31
SKP1-207ENST00000520417 ARHGEF28Q8N1W1 1705 aaKnown RBP0.61□□□□□ -2.31
SKP1-207ENST00000520417 DENND4CQ5VZ89 1909 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 TRAV23DV6A0A075B6W5 121 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 TRAV5A0A0B4J249 113 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 hDV103S1A0JD37 113 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 CSN2P05814 226 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 FABP1P07148 127 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 FREM3P0C091 2139 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 FABP2P12104 132 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 COX7CP15954 63 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 NDUFA6P56556 154 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 VMA21Q3ZAQ7 101 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 SPRNQ5BIV9 151 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 FAM216BQ8N7L0 139 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 Q8TAT8 98 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 PLEKHB2Q96CS7 222 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 CARD19Q96LW7 228 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 AMELYQ99218 206 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 TCEAL2Q9H3H9 227 aaPredicted RBP0.6□□□□□ -2.31
SKP1-207ENST00000520417 OTORQ9NRC9 128 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 ATPIF1Q9UII2 106 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 UHRF1BP1Q6BDS2 1440 aa0.6□□□□□ -2.31
SKP1-207ENST00000520417 KIAA1549Q9HCM3 1950 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 CASP8AP2Q9UKL3 1982 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 C5orf58C9J3I9 102 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 IFNA21P01568 189 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 RPL35P42766 123 aaKnown RBP0.59□□□□□ -2.31
SKP1-207ENST00000520417 MRPS36P82909 103 aaKnown RBP0.59□□□□□ -2.31
SKP1-207ENST00000520417 ZNF833PQ6ZTB9 187 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 ARPINQ7Z6K5 226 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 OR10AG1Q8NH19 301 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 GRPEL2Q8TAA5 225 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 ZC2HC1AQ96GY0 325 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 OR2H1Q9GZK4 316 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 LAMTOR2Q9Y2Q5 125 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 ASB4Q9Y574 426 aa0.59□□□□□ -2.31
SKP1-207ENST00000520417 MYO18AQ92614 2054 aaKnown RBP0.59□□□□□ -2.32
SKP1-207ENST00000520417 SBF1O95248 1867 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 EIF3AQ14152 1382 aaKnown RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 KDM6AO15550 1401 aaPredicted RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 A0A087WSZ3 146 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 A0A1B0GV72 72 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 C5orf67F2Z3F1 127 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 PGRMC1O00264 195 aaKnown RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 KPNA4O00629 521 aaPredicted RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 IGLV1-51P01701 117 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 S100A11P31949 105 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 MIR22HGQ0VDD5 57 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 DIAPH2-AS1Q14236 149 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 SPATA45Q537H7 98 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 HAGHLQ6PII5 290 aaPredicted RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 PHF5AQ7RTV0 110 aaKnown RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 OR4B1Q8NGF8 309 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 OR5H6Q8NGV6 325 aa0.58□□□□□ -2.32
SKP1-207ENST00000520417 TNRC6BQ9UPQ9 1833 aaKnown RBP0.58□□□□□ -2.32
SKP1-207ENST00000520417 CEP164Q9UPV0 1460 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms