RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SBF1O95248 1867 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 CCDC88AQ3V6T2 1871 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 WNK3Q9BYP7 1800 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 OVOS2A0A0J9YW53 1432 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 OVOS2Q6IE36 1432 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 FGD6Q6ZV73 1430 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 C2orf70A6NJV1 201 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 MFSD11O43934 449 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 OR1I1O60431 355 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 IFNA17P01571 189 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 PRB1P04280 392 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 ZNF25P17030 456 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 EVI2AP22794 236 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 BRS3P32247 399 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 CTAGE3PQ8IX95 158 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 PLEKHB2Q96CS7 222 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 C14orf132Q9NPU4 83 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 HSPB8Q9UJY1 196 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 SOX21Q9Y651 276 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 AKAP12Q02952 1782 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 RIMBP3CA6NJZ7 1639 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 RIMBP3BA6NNM3 1639 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 IBTKQ9P2D0 1353 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 RIMBP3Q9UFD9 1639 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 MED23Q9ULK4 1368 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 EML6Q6ZMW3 1958 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 PHIPQ8WWQ0 1821 aa1.94□□□□□ -2.1
HMGB1P46-201ENST00000520062 ATG2AQ2TAZ0 1938 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 ANAPC1Q9H1A4 1944 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 COL4A1P02462 1669 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 ZNF609O15014 1411 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 A0A087WX48 190 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAV12-1A0A0B4J245 112 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 C20orf202A1L168 122 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 J3KT08 172 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 NDUFB3O43676 98 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 S100A11P31949 105 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 PSG9Q00887 426 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 MORN2Q502X0 79 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 ACBD7Q8N6N7 88 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 TSTD1Q8NFU3 115 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 OR4C6Q8NH72 309 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 CCDC115Q96NT0 180 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 OR2J1Q9GZK6 312 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 NIT2Q9NQR4 276 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 PCTPQ9UKL6 214 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAPPC2LQ9UL33 140 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 FOCADQ5VW36 1801 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 MYH7BA7E2Y1 1941 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 CR1P17927 2039 aa1.93□□□□□ -2.1
HMGB1P46-201ENST00000520062 CD109Q6YHK3 1445 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 ARHGEF28Q8N1W1 1705 aaKnown RBP1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 KIF20BQ96Q89 1820 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAV36DV7A0A075B6V5 113 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 A8MWV9 139 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 F6UZH7 168 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 LYZL6O75951 148 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 SCTP09683 121 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 NFYBP25208 207 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 CMPK1P30085 196 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 GLRXP35754 106 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 AKR1D1P51857 326 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 PKIAP61925 76 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 PPP3R1P63098 170 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 MYL5Q02045 173 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 LTC4SQ16873 150 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 C8orf59Q8N0T1 100 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 ST6GALNAC3Q8NDV1 305 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 THEM6Q8WUY1 208 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 SFT2D1Q8WV19 159 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 ARL11Q969Q4 196 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 LAMTOR2Q9Y2Q5 125 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 U3KQ87 197 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 DOCK4Q8N1I0 1966 aa1.92□□□□□ -2.1
HMGB1P46-201ENST00000520062 CEP162Q5TB80 1403 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 MYH13Q9UKX3 1938 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 ADGBQ8N7X0 1667 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAV3A0A0B4J244 114 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 IGKV3D-7A0A0C4DH55 119 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 IGKV3OR2-268A0A0C4DH90 116 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 J3QR89 54 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 TMEM256-PLSCR3K7ERE1 68 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 M0R2Z0 102 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 CORTO00230 105 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 IGF2P01344 180 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 NCS1P62166 190 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 CDK5R1Q15078 307 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 OR8B8Q15620 311 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 OCIAD2Q56VL3 154 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 SOSTDC1Q6X4U4 206 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 CROCCP2Q86T23 111 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 LINC00301Q8NCQ3 95 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 REG4Q9BYZ8 158 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 LINC00470Q9BZP3 86 aa1.91□□□□□ -2.1
HMGB1P46-201ENST00000520062 MED11Q9P086 117 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 560.3 ms