RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 BANF2Q9H503 90 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 C5orf66Q9H5L9 145 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 ENY2Q9NPA8 101 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 POMPQ9Y244 141 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 AGRNO00468 2067 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 IGKV1-6A0A0C4DH72 117 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 TINCRA0A1B0GVN0 87 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 A0A1B0GX51 115 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 TAAR5O14804 337 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 HPRT1P00492 218 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 MT-ND4LP03901 98 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 ALPLP05186 524 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 CRYGDP07320 174 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 APELAP0DMC3 54 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 GATA1P15976 413 aaPredicted RBP4.36□□□□□ -1.71
PABPC1-207ENST00000518716 S100A7P31151 101 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 PAX9P55771 341 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 PAFAH1B2P68402 229 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 RBMS2Q15434 407 aaKnown RBP4.36□□□□□ -1.71
PABPC1-207ENST00000518716 NEDD8Q15843 81 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 SSX1Q16384 188 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 C15orf32Q32M92 178 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 PYY3Q5JQD4 70 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 C1orf194Q5T5A4 169 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 RPL22L1Q6P5R6 122 aaKnown RBP4.36□□□□□ -1.71
PABPC1-207ENST00000518716 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 TEX45Q8NA69 505 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 LYPD6BQ8NI32 183 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 C11orf45Q8TAV5 145 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 VN1R17PQ8TDU5 208 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 TMEM170AQ8WVE7 144 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 IL1F10Q8WWZ1 152 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 SRSF12Q8WXF0 261 aaKnown RBP4.36□□□□□ -1.71
PABPC1-207ENST00000518716 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 TMEM70Q9BUB7 260 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 NAT8Q9UHE5 227 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 EXOSC1Q9Y3B2 195 aaKnown RBP4.36□□□□□ -1.71
PABPC1-207ENST00000518716 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
PABPC1-207ENST00000518716 A0A1B0GU03 582 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 A0A1B0GV50 99 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 A0A1B0GW64 132 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 H3BMQ9 156 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 HMGB3O15347 200 aaKnown RBP4.35□□□□□ -1.71
PABPC1-207ENST00000518716 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 OR5AC1P0C628 307 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 EVI2AP22794 236 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 LEPP41159 167 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 GNG4P50150 75 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 MFAP2P55001 183 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 QRFPP83859 136 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 LGALS9BQ3B8N2 356 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 FAM162BQ5T6X4 162 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 Q6ZR54 194 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 C6orf201Q7Z4U5 140 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 AMIGO2Q86SJ2 522 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.35□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF485Q8NCK3 441 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 OR1S2Q8NGQ3 325 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 OR4X1Q8NH49 305 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 RHOXF1Q8NHV9 184 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 TMED6Q8WW62 240 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 PGLYRP3Q96LB9 341 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 LINC00052Q96N35 136 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 TM2D1Q9BX74 207 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 AMBNQ9NP70 447 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 ABRACLQ9P1F3 81 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 SS18L2Q9UHA2 77 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 ERG28Q9UKR5 140 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 TMED3Q9Y3Q3 217 aa4.35□□□□□ -1.71
PABPC1-207ENST00000518716 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 A0A0A6YYD4 124 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 A0A1W2PRE2 83 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 FOXI3A8MTJ6 420 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-207ENST00000518716 IGLL5B9A064 214 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 C11orf94C9JXX5 98 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 E7EUB6 86 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 H0YIZ8 118 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 M0R1X1 148 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 PDCD5O14737 125 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 CCL25O15444 150 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 FABP7O15540 132 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 XRCC3O43542 346 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 MPDU1O75352 247 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 SCTP09683 121 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 ESDP10768 282 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 RPL12P30050 165 aaKnown RBP4.34□□□□□ -1.71
PABPC1-207ENST00000518716 P2RY1P47900 373 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 CLDN12P56749 244 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 TAS2R31P59538 309 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 NCS1P62166 190 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
PABPC1-207ENST00000518716 PEA15Q15121 130 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 Q499Y3 187 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 FAM106AQ4KMX7 169 aa4.34□□□□□ -1.71
PABPC1-207ENST00000518716 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms