RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 TXNDC9O14530 226 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 BANF1O75531 89 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 NDUFB2O95178 105 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 NDUFC2O95298 119 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 IFNA14P01570 189 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 IGLV3-19P01714 112 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 C1QBP02746 253 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 HLA-EP13747 358 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 SPI1P17947 270 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 S100GP29377 79 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 GLRXP35754 106 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 LPAR6P43657 344 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 ATP5G3P48201 142 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 FOXA1P55317 472 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 TMEM86AQ8N2M4 240 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 FAM24BQ8N5W8 94 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 ZNF439Q8NDP4 499 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 LZICQ8WZA0 190 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 TOMM6Q96B49 74 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 C16orf95Q9H693 158 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
CSMD1-203ENST00000518151 ASF1BQ9NVP2 202 aa2.31□□□□□ -2.04
CSMD1-203ENST00000518151 NIPBLQ6KC79 2804 aaeCLIP2.3□□□□□ -2.04
CSMD1-203ENST00000518151 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 IGHV3-73A0A0B4J1V6 119 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 LOC102725191A0A1B0GVB3 256 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 A0A1B0GW54 56 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 FUOMA2VDF0 154 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 GRIFINA4D1Z8 144 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 GGTLC3B5MD39 225 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 H7C1C5 153 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 EDF1O60869 148 aaKnown RBP2.3□□□□□ -2.04
CSMD1-203ENST00000518151 IGKV1-5P01602 117 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BOP23527 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BBP33778 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 CD200P41217 278 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BDP58876 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 LCN6P62502 163 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BCP62807 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST2H2BEQ16778 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.3□□□□□ -2.04
CSMD1-203ENST00000518151 AADACL3Q5VUY0 350 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 MSRB3Q8IXL7 192 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 OR13D1Q8NGV5 346 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 DYDC1Q8WWB3 177 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 SLC7A6Q92536 515 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BHQ93079 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BNQ99877 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIST1H2BMQ99879 126 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 SH3BGRL3Q9H299 93 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 SMDT1Q9H4I9 107 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 PARVBQ9HBI1 364 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 SAR1AQ9NR31 198 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 ACER3Q9NUN7 267 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 IL36BQ9NZH7 164 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 CSPG4Q6UVK1 2322 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 HIVEP1P15822 2718 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 OTOGQ6ZRI0 2925 aa2.3□□□□□ -2.04
CSMD1-203ENST00000518151 CENPEQ02224 2701 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 SMIM31A0A1B0GVY4 71 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MAP1LC3B2A6NCE7 125 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 C17orf51A8MQB3 221 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 C17orf98A8MV24 154 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MIF4GDA9UHW6 222 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 UBFD1O14562 309 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 LEPROTO15243 131 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 IFNA7P01567 189 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 PRM2P04554 102 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 BLVRBP30043 206 aaPredicted RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 RBM11P57052 281 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 TPI1P60174 286 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 RPL26P61254 145 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 CCL20P78556 96 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MEF2BQ02080 365 aaPredicted RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 RPL22L1Q6P5R6 122 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 DCUN1D2Q6PH85 259 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 Q6Q795 121 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 ZNF767PQ75MW2 155 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 ZNF720Q7Z2F6 126 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 LYPD6Q86Y78 171 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 C12orf45Q8N5I9 185 aaPredicted RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 Q8NAQ8 132 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 OR10P1Q8NGE3 313 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MUC7Q8TAX7 377 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 NAT14Q8WUY8 206 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 H1FXQ92522 213 aaKnown RBP2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MIEN1Q9BRT3 115 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 MAP1LC3BQ9GZQ8 125 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 TVP23BQ9NYZ1 205 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 RP1P56715 2156 aa2.29□□□□□ -2.04
CSMD1-203ENST00000518151 NYNRINQ9P2P1 1898 aaKnown RBP2.28□□□□□ -2.04
CSMD1-203ENST00000518151 TRAV41A0A0B4J266 112 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms