RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CXCR6O00574 342 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 MAGEB4O15481 346 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 SSNA1O43805 119 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 RPS17P08708 135 aaKnown RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 MRPL3P09001 348 aaKnown RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 CXCL2P19875 107 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 NTF3P20783 257 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 CDKN2CP42773 168 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 NKX2-5P52952 324 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 PCBD1P61457 104 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 TMEM267Q0VDI3 215 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 BTN1A1Q13410 526 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 DIAPH2-AS1Q14236 149 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 WFDC2Q14508 124 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 ZNF141Q15928 474 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 SH2D6Q7Z4S9 175 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 FAM19A5Q7Z5A7 132 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 DAZ4Q86SG3 579 aaKnown RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 HS3ST5Q8IZT8 346 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 MIR7-3HGQ8N6C7 128 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 OR1M1Q8NGA1 313 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 OR5D18Q8NGL1 313 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 OR8S1Q8NH09 359 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 RNF133Q8WVZ7 376 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 MAL2Q969L2 176 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 PTH2Q96A98 100 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 STACQ99469 402 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 RTBDNQ9BSG5 229 aaPredicted RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 CST11Q9H112 138 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 VSIRQ9H7M9 311 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 ZNF286AQ9HBT8 521 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 DAZ1Q9NQZ3 744 aaKnown RBP1.81□□□□□ -2.12
CPNE3-204ENST00000517862 BABAM2Q9NXR7 383 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 RFNGQ9Y644 331 aa1.81□□□□□ -2.12
CPNE3-204ENST00000517862 TRAV5A0A0B4J249 113 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 C7orf66A4D0T2 115 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 EVPLLA8MZ36 301 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 K7EPK0 472 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 LECT2O14960 151 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 MED6O75586 246 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 PROSCO94903 275 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 NRASP01111 189 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 HRASP01112 189 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 KRASP01116 189 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 IGKV1D-12P01611 117 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 OR5AC1P0C628 307 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 GTF2F2P13984 249 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 HSPA13P48723 471 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 TCL1AP56279 114 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 HPCAP84074 193 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 DEFA5Q01523 94 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 SPIN4Q56A73 249 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 FAM27BQ5VT28 67 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 UNQ5815/PRO19632Q6UWF5 114 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 ADM2Q7Z4H4 148 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 TMEM144Q7Z5S9 345 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 COMMD7Q86VX2 200 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 YIPF7Q8N8F6 280 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 Q8N9L7 120 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 OR1P1Q8NH06 330 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 OR52N1Q8NH53 320 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 CDC26Q8NHZ8 85 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 CYGBQ8WWM9 190 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 SLC25A44Q96H78 314 aaPredicted RBP1.8□□□□□ -2.12
CPNE3-204ENST00000517862 REEP6Q96HR9 211 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 PACRGQ96M98 296 aaPredicted RBP1.8□□□□□ -2.12
CPNE3-204ENST00000517862 THTPAQ9BU02 230 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 SLC2A9Q9NRM0 540 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 SPANXB1Q9NS25 103 aaPredicted RBP1.8□□□□□ -2.12
CPNE3-204ENST00000517862 KLK12Q9UKR0 248 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 GUCA1BQ9UMX6 200 aa1.8□□□□□ -2.12
CPNE3-204ENST00000517862 A0A087WUJ7 227 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 A0A096LPI6 279 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TGIF2-C20orf24A0A0A6YYL0 155 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 GNG14A0A1W2PPG7 69 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 hADV38S2A0JD32 116 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 RFPL4AA6NLU0 287 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 A8MU10 97 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 RFPL4AL1F8VTS6 287 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 OR7C2O60412 319 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 HLA-DRB1P01911 266 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 CST2P09228 141 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 IFI6P09912 130 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 C8orf88P0DMB2 117 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 RPL12P30050 165 aaKnown RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 PPP1R2P41236 205 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 MAGOHP61326 146 aaKnown RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 GNA13Q14344 377 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TDRG1Q3Y452 100 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 MRPL2Q5T653 305 aaKnown RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 OGFRL1Q5TC84 451 aaPredicted RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TNFAIP8L2Q6P589 184 aaPredicted RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 PRSS54Q6PEW0 395 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 C10orf67Q8IYJ2 551 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TMEM75Q8N9X5 138 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 OR9I1Q8NGQ6 314 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TNFAIP8L1Q8WVP5 186 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 ASB13Q8WXK3 278 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms