RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CLECL1Q8IZS7 167 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 OR2T35Q8NGX2 323 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 TEX37Q96LM6 180 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 TP53RKQ96S44 253 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 TMEM70Q9BUB7 260 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 TNRC6BQ9UPQ9 1833 aaKnown RBP0.57□□□□□ -2.32
SKP1-203ENST00000517625 MED12LQ86YW9 2145 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 CCDC144AA2RUR9 1427 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 RP1P56715 2156 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 TRBV6-4A0A1B0GX49 114 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 A0A1W2PPM0 123 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 CCL25O15444 150 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 GGCTO75223 188 aaKnown RBP0.56□□□□□ -2.32
SKP1-203ENST00000517625 IFNA7P01567 189 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 CST2P09228 141 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 ZNF25P17030 456 aaPredicted RBP0.56□□□□□ -2.32
SKP1-203ENST00000517625 SRIP30626 198 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 PSG9Q00887 426 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 BCL2L15Q5TBC7 163 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 LINC00322Q6ZN03 302 aaPredicted RBP0.56□□□□□ -2.32
SKP1-203ENST00000517625 ST6GALNAC3Q8NDV1 305 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 CANT1Q8WVQ1 401 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 ARL2BPQ9Y2Y0 163 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 LY96Q9Y6Y9 160 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 ROS1P08922 2347 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 SBF1O95248 1867 aa0.56□□□□□ -2.32
SKP1-203ENST00000517625 MICAL3Q7RTP6 2002 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 CSPG4Q6UVK1 2322 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 IGLV3-32A0A0A0MS00 114 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 FAM159BA6NKW6 160 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 TMEM210A6NLX4 147 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 TIMM17BO60830 172 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 GADD45GO95257 159 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 DSCR4P56555 118 aaPredicted RBP0.55□□□□□ -2.32
SKP1-203ENST00000517625 HSPE1P61604 102 aaKnown RBP0.55□□□□□ -2.32
SKP1-203ENST00000517625 MRPS25P82663 173 aaKnown RBP0.55□□□□□ -2.32
SKP1-203ENST00000517625 REEP5Q00765 189 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 GOLT1AQ6ZVE7 132 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 PDZD9Q8IXQ8 264 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 Q8IYB0 196 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 OR10X1Q8NGY0 326 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 ZNF431Q8TF32 576 aaPredicted RBP0.55□□□□□ -2.32
SKP1-203ENST00000517625 ORMDL1Q9P0S3 153 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 TMEM14CQ9P0S9 112 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 EXPH5Q8NEV8 1989 aa0.55□□□□□ -2.32
SKP1-203ENST00000517625 ZCCHC6Q5VYS8 1495 aaKnown RBP0.54□□□□□ -2.32
SKP1-203ENST00000517625 CECR2Q9BXF3 1484 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 CDK12Q9NYV4 1490 aaPredicted RBP0.54□□□□□ -2.32
SKP1-203ENST00000517625 DOCK5Q9H7D0 1870 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 E7EUB6 86 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 NCR3O14931 201 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 NDUFB3O43676 98 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 IFNA6P05013 189 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 C4orf22Q6V702 233 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 Q8N6K4 173 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 OR10K1Q8NGX5 313 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 LYSMD1Q96S90 227 aa0.54□□□□□ -2.32
SKP1-203ENST00000517625 SLC25A21Q9BQT8 299 aaPredicted RBP0.54□□□□□ -2.32
SKP1-203ENST00000517625 LAMA1P25391 3075 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 VPS13CQ709C8 3753 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 HECW1Q76N89 1606 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 SPTBN2O15020 2390 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 A0A087WSZ3 146 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 C17orf112F2Z3M2 114 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 SERPINA1P01009 418 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 CYBAP13498 195 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 ATP5G3P48201 142 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 ROMO1P60602 79 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 UBE2BP63146 152 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 TMED2Q15363 201 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 ZNF833PQ6ZTB9 187 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 GRINAQ7Z429 371 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 GKN2Q86XP6 184 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 STAG3L4Q8TBR4 150 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 LINC00052Q96N35 136 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 OPTCQ9UBM4 332 aa0.53□□□□□ -2.32
SKP1-203ENST00000517625 FAM32AQ9Y421 112 aaKnown RBP0.53□□□□□ -2.32
SKP1-203ENST00000517625 SHANK2Q9UPX8 1470 aa0.53□□□□□ -2.33
SKP1-203ENST00000517625 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.33
SKP1-203ENST00000517625 DCHS2Q6V1P9 2916 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 ADGRG4Q8IZF6 3080 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 CADP27708 2225 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 TLCD2A6NGC4 264 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 AIPO00170 330 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 TAX1BP3O14907 124 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 C1QBP02746 253 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 HLA-EP13747 358 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 EIF5AL1Q6IS14 154 aaKnown RBP0.52□□□□□ -2.33
SKP1-203ENST00000517625 SBSPONQ8IVN8 264 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 PLPP5Q8NEB5 264 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 ENY2Q9NPA8 101 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 ARL5AQ9Y689 179 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 CLASP1Q7Z460 1538 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 ATMQ13315 3056 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 ARHGEF28Q8N1W1 1705 aaKnown RBP0.52□□□□□ -2.33
SKP1-203ENST00000517625 LAMA5O15230 3695 aa0.52□□□□□ -2.33
SKP1-203ENST00000517625 CCDC88AQ3V6T2 1871 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms