RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 ZNRD1Q9P1U0 126 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 SIGLEC9Q9Y336 463 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 CACNA1EQ15878 2313 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 TRBV19A0A075B6N1 114 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 INS-IGF2F8WCM5 200 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 NCR2O95944 276 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 IGHV1-8P0DP01 117 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
CPNE3-203ENST00000517490 PATE2Q6UY27 113 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 GTSCR1Q86UQ5 136 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 LINC00311Q8N616 119 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 SCGB3A1Q96QR1 104 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 METTL26Q96S19 204 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 SIGLEC8Q9NYZ4 499 aa5.35□□□□□ -1.55
CPNE3-203ENST00000517490 LOC105371242A0A075B767 164 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 DPM3Q9P2X0 92 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 SVILO95425 2214 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 NBR2O15453 112 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 NDUFA3O95167 84 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 DLX1P56177 255 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 DLX6P56179 175 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 FXYD7P58549 80 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 RAXQ9Y2V3 346 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 DOCK7Q96N67 2140 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 MBD3L4A6NDZ8 208 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 MBD3L3A6NE82 208 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 MBD3L5A6NJ08 208 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 APOMO95445 188 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 GDF5OSQ5U4N7 250 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 NUP37Q8NFH4 326 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 MBD3L2Q8NHZ7 208 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-203ENST00000517490 GTSF1Q8WW33 167 aa5.34□□□□□ -1.55
CPNE3-203ENST00000517490 NPIPB5A8MRT5 1133 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 TMEM178BH3BS89 294 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 CRXO43186 299 aaPredicted RBP5.34□□□□□ -1.56
CPNE3-203ENST00000517490 PPP1R17O96001 155 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 DUX4L9Q6RFH8 374 aaPredicted RBP5.34□□□□□ -1.56
CPNE3-203ENST00000517490 ZC2HC1AQ96GY0 325 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 KLK15Q9H2R5 256 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 S4R3C0 116 aa5.34□□□□□ -1.56
CPNE3-203ENST00000517490 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 TMEM213A2RRL7 107 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 LHBP01229 141 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 PLNP26678 52 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 BSPH1Q075Z2 132 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 LAGE3Q14657 143 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 ECSCRQ19T08 205 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 TEX36Q5VZQ5 186 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 ARPC1AQ92747 370 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 IGLV3-9A0A075B6K5 115 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 IGKV2-40A0A087WW87 121 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-203ENST00000517490 F8W1H4 67 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 IGKV2D-40P01614 121 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-203ENST00000517490 EVI2AP22794 236 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 RPL13AP40429 203 aaKnown RBP5.33□□□□□ -1.56
CPNE3-203ENST00000517490 MRPL51Q4U2R6 128 aaKnown RBP5.33□□□□□ -1.56
CPNE3-203ENST00000517490 Q71RC1 249 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-203ENST00000517490 SPATA12Q7Z6I5 190 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 SLC50A1Q9BRV3 221 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 PHLDA3Q9Y5J5 127 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 DNAH12Q6ZR08 3092 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 M0R3E3 92 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 SCGB1A1P11684 91 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 GP9P14770 177 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 ZNF562Q6V9R5 426 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 OR10J6PQ8NGY7 276 aa5.33□□□□□ -1.56
CPNE3-203ENST00000517490 SMKR1H3BMG3 65 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 FAM106CPP0CH98 169 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 CYSLTR1Q9Y271 337 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 C19orf71A6NCJ1 209 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 CGB1A6NKQ9 187 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 SAP30O75446 220 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 CKS1BP61024 79 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 C8orf31Q8N9H6 132 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 ZNF418Q8TF45 676 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 TMEM158Q8WZ71 300 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 PRSS22Q9GZN4 317 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 GEMIN7Q9H840 131 aaKnown RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 FER1L5A0AVI2 2057 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 K7EM74 188 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 APOBEC3AP31941 199 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 PAPPA-AS1Q5QFB9 102 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 DGAT2L7PQ6IED9 249 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 FAM57AQ8TBR7 257 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 NEU4Q8WWR8 484 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 SPAARA0A1B0GVQ0 90 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 H3BRN7 92 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 TAL2Q16559 108 aa5.32□□□□□ -1.56
CPNE3-203ENST00000517490 CD300EQ496F6 205 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 COLQQ9Y215 455 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-203ENST00000517490 CD59P13987 128 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms