RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 OR2T1O43869 369 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 BANF1O75531 89 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 LYZL6O75951 148 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CRYZL1O95825 349 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 HMGN2P05204 90 aaKnown RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 MSMBP08118 114 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 SRP19P09132 144 aaKnown RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 INAFM2P0DMQ5 153 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CBR1P16152 277 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CRYBB3P26998 211 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 GLRXP35754 106 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CRYBA4P53673 196 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 FOXA1P55317 472 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 KLF3P57682 345 aaPredicted RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 TCTAP57738 103 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 DNAJB13P59910 316 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 COPZ1P61923 177 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 GNG11P61952 73 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MOBPQ13875 183 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 KCNJ8Q15842 424 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 LGALS9BQ3B8N2 356 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CCDC153Q494R4 210 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 ZNF660Q6AZW8 331 aaPredicted RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 LGALS9CQ6DKI2 356 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 NOXRED1Q6NXP6 359 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 RASL11AQ6T310 242 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 SDIM1Q6ZPB5 146 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 Q6ZS49 121 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 AAED1Q7RTV5 226 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 OR13C8Q8NGS7 320 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 OR10A6Q8NH74 314 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MUC7Q8TAX7 377 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MRPL30Q8TCC3 161 aaKnown RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 GPR119Q8TDV5 335 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 PPP3R2Q96LZ3 170 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 NMNAT3Q96T66 252 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MGLLQ99685 303 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 HOPXQ9BPY8 73 aaPredicted RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 TMEM147Q9BVK8 224 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 RSPO3Q9BXY4 272 aaPredicted RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 LINC00470Q9BZP3 86 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 BPESC1Q9GZL8 116 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 RNASE7Q9H1E1 156 aaKnown RBP1.74□□□□□ -2.13
HERC4-215ENST00000515753 XAGE1AQ9HD64 81 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 BIN3Q9NQY0 253 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 ACER3Q9NUN7 267 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 UQCC1Q9NVA1 299 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MED29Q9NX70 200 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 CALML5Q9NZT1 146 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 SMPXQ9UHP9 88 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 TMEM56-RWDD3S4R434 201 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 F8P00451 2351 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 ANKRD36A6QL64 1941 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 ANKRD17O75179 2603 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 SPTBN1Q01082 2364 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 ABCA12Q86UK0 2595 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 PCNX1Q96RV3 2341 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 DSPPQ9NZW4 1301 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 FBN2P35556 2912 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 TRBV20OR9-2A0A075B6H5 130 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 IGLV2-18A0A075B6J9 118 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 NBPF19A0A087WUL8 3843 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 A0A1B0GV72 72 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 LOC102725191A0A1B0GVB3 256 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 EXOC1LA0A1B0GW35 172 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 IGSF23A1L1A6 192 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 PPP5D1E7EU14 171 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 PLA2G10O15496 165 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 ATG12O94817 140 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 UBL3O95164 117 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 DBIP07108 87 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 ZNF705DP0CH99 300 aaPredicted RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 SULT1A3P0DMM9 295 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 SULT1A4P0DMN0 295 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 CRHBPP24387 322 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 RPL27AP46776 148 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 GABRA2P47869 451 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 POLR2HP52434 150 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 RBM11P57052 281 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 TAS2R20P59543 309 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 RPS20P60866 119 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 ZNF117Q03924 483 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 FOXF1Q12946 379 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 ZNF141Q15928 474 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 C12orf74Q32Q52 190 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 DNLZQ5SXM8 178 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 IBA57Q5T440 356 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 ZNF322Q6U7Q0 402 aaPredicted RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 HMGN2P46Q86SG4 172 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 IFT20Q8IY31 132 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 DAND5Q8N907 189 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 ZNF709Q8N972 641 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 OR11H1Q8NG94 326 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 OR13C6PQ8NH95 151 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 TEX47Q8TBZ9 253 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 ACOT12Q8WYK0 555 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 C11orf40Q8WZ69 217 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 POP5Q969H6 163 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 SDF2Q99470 211 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 DPY30Q9C005 99 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms