RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 EIF3GO75821 320 aaKnown RBP eCLIP15.71■□□□□ 0.11
LSM6-207ENST00000515311 CXorf1O96002 111 aa15.71■□□□□ 0.11
LSM6-207ENST00000515311 UBE2L3P68036 154 aaKnown RBP15.71■□□□□ 0.11
LSM6-207ENST00000515311 LCN15Q6UWW0 184 aa15.71■□□□□ 0.11
LSM6-207ENST00000515311 MBD3L1Q8WWY6 194 aa15.71■□□□□ 0.11
LSM6-207ENST00000515311 MAP1LC3BQ9GZQ8 125 aa15.71■□□□□ 0.11
LSM6-207ENST00000515311 NOTCH1P46531 2555 aa15.71■□□□□ 0.1
LSM6-207ENST00000515311 SOCS3O14543 225 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 ZNF253O75346 499 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 OR10J4P0C629 311 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 TFPI2P48307 235 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 PDE6HQ13956 83 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 ZNF586Q9NXT0 402 aa15.7■□□□□ 0.1
LSM6-207ENST00000515311 TRBV19A0A075B6N1 114 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 ISLRO14498 428 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 NBEAP1P0C6P0 100 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 GCHFRP30047 84 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 PSMB3P49720 205 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 KRTAP10-11P60412 298 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 WFDC3Q8IUB2 231 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 ZNF680Q8NEM1 530 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 SAT2Q96F10 170 aaPredicted RBP15.69■□□□□ 0.1
LSM6-207ENST00000515311 SLC50A1Q9BRV3 221 aa15.69■□□□□ 0.1
LSM6-207ENST00000515311 IFNA7P01567 189 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 H2AFB1P0C5Y9 115 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 SUN5Q8TC36 379 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 SFT2D1Q8WV19 159 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 FAM110AQ9BQ89 295 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 TMEM167BQ9NRX6 74 aa15.68■□□□□ 0.1
LSM6-207ENST00000515311 TRAV1-1A0A0B4J248 108 aa15.67■□□□□ 0.1
LSM6-207ENST00000515311 ZNF705EA8MWA4 302 aaPredicted RBP15.67■□□□□ 0.1
LSM6-207ENST00000515311 ID1P41134 155 aa15.67■□□□□ 0.1
LSM6-207ENST00000515311 CMC4P56277 68 aaPredicted RBP15.67■□□□□ 0.1
LSM6-207ENST00000515311 SNRPD3P62318 126 aaKnown RBP15.67■□□□□ 0.1
LSM6-207ENST00000515311 GTSCR1Q86UQ5 136 aa15.67■□□□□ 0.1
LSM6-207ENST00000515311 LRRC20Q8TCA0 184 aa15.67■□□□□ 0.1
LSM6-207ENST00000515311 C16orf92Q96LL3 132 aa15.67■□□□□ 0.1
LSM6-207ENST00000515311 ZNF331Q9NQX6 463 aaPredicted RBP15.67■□□□□ 0.1
LSM6-207ENST00000515311 SLC17A3O00476 420 aa15.66■□□□□ 0.1
LSM6-207ENST00000515311 NDUFB4O95168 129 aa15.66■□□□□ 0.1
LSM6-207ENST00000515311 SNRPCP09234 159 aaKnown RBP15.66■□□□□ 0.1
LSM6-207ENST00000515311 FGF8P55075 233 aaPredicted RBP15.66■□□□□ 0.1
LSM6-207ENST00000515311 FAM24BQ8N5W8 94 aa15.66■□□□□ 0.1
LSM6-207ENST00000515311 BLNKQ8WV28 456 aa15.66■□□□□ 0.1
LSM6-207ENST00000515311 CLEC5AQ9NY25 188 aa15.66■□□□□ 0.1
LSM6-207ENST00000515311 TRAV8-2A0A0B4J237 113 aa15.65■□□□□ 0.1
LSM6-207ENST00000515311 TEX46H3BTG2 121 aa15.65■□□□□ 0.1
LSM6-207ENST00000515311 H3BTX0 84 aa15.65■□□□□ 0.1
LSM6-207ENST00000515311 HBE1P02100 147 aa15.65■□□□□ 0.1
LSM6-207ENST00000515311 PSG9Q00887 426 aa15.65■□□□□ 0.1
LSM6-207ENST00000515311 ZNF688P0C7X2 276 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 CD81P60033 236 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 BLOC1S1P78537 153 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 ODF3L2Q3SX64 289 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 IQCF2Q8IXL9 164 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 LYPD1Q8N2G4 141 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 MAP6D1Q9H9H5 199 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 UBQLN2Q9UHD9 624 aa15.64■□□□□ 0.09
LSM6-207ENST00000515311 CD7P09564 240 aa15.63■□□□□ 0.09
LSM6-207ENST00000515311 PRR25Q96S07 402 aa15.63■□□□□ 0.09
LSM6-207ENST00000515311 OR11H12B2RN74 326 aa15.62■□□□□ 0.09
LSM6-207ENST00000515311 PSMG4Q5JS54 123 aa15.62■□□□□ 0.09
LSM6-207ENST00000515311 TMPRSS5Q9H3S3 457 aa15.62■□□□□ 0.09
LSM6-207ENST00000515311 AAMDCQ9H7C9 122 aa15.62■□□□□ 0.09
LSM6-207ENST00000515311 C19orf73Q9NVV2 129 aa15.62■□□□□ 0.09
LSM6-207ENST00000515311 PPT1P50897 306 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 RANP62826 216 aaKnown RBP15.61■□□□□ 0.09
LSM6-207ENST00000515311 Q8N1Y9 231 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 RNF182Q8N6D2 247 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 MRPL53Q96EL3 112 aaKnown RBP15.61■□□□□ 0.09
LSM6-207ENST00000515311 LINC00052Q96N35 136 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 PRELID1Q9Y255 219 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 ARL2-SNX15V9GYD0 113 aa15.61■□□□□ 0.09
LSM6-207ENST00000515311 DEFB131AP59861 70 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 PSG3Q16557 428 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 IGFL4Q6B9Z1 124 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 LYPD6BQ8NI32 183 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 C20orf173Q96LM9 149 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 Q9H3A6 140 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 OTORQ9NRC9 128 aa15.6■□□□□ 0.09
LSM6-207ENST00000515311 A0A1B0GV50 99 aa15.59■□□□□ 0.09
LSM6-207ENST00000515311 A0A1W2PRE2 83 aa15.59■□□□□ 0.09
LSM6-207ENST00000515311 IFITM2Q01629 132 aa15.59■□□□□ 0.09
LSM6-207ENST00000515311 ZNF767PQ75MW2 155 aa15.59■□□□□ 0.09
LSM6-207ENST00000515311 EXOC3-AS1Q8N2X6 119 aa15.59■□□□□ 0.09
LSM6-207ENST00000515311 HLA-DMBP28068 263 aa15.58■□□□□ 0.08
LSM6-207ENST00000515311 PMS2P11Q13670 270 aa15.58■□□□□ 0.08
LSM6-207ENST00000515311 ICAM4Q14773 271 aa15.58■□□□□ 0.08
LSM6-207ENST00000515311 ZNF738Q8NE65 137 aa15.58■□□□□ 0.08
LSM6-207ENST00000515311 CCL20P78556 96 aa15.57■□□□□ 0.08
LSM6-207ENST00000515311 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
LSM6-207ENST00000515311 NKX6-2Q9C056 277 aaPredicted RBP15.57■□□□□ 0.08
LSM6-207ENST00000515311 MANBALQ9NQG1 85 aa15.57■□□□□ 0.08
LSM6-207ENST00000515311 AURKAIP1Q9NWT8 199 aaPredicted RBP15.57■□□□□ 0.08
LSM6-207ENST00000515311 YTHDF2Q9Y5A9 579 aaKnown RBP15.57■□□□□ 0.08
LSM6-207ENST00000515311 FAM74A7A6NL05 159 aa15.56■□□□□ 0.08
LSM6-207ENST00000515311 FOXI2Q6ZQN5 318 aa15.56■□□□□ 0.08
LSM6-207ENST00000515311 ARL6IP6Q8N6S5 226 aa15.56■□□□□ 0.08
LSM6-207ENST00000515311 RPUSD4Q96CM3 377 aaKnown RBP15.56■□□□□ 0.08
LSM6-207ENST00000515311 WFDC10AQ9H1F0 79 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms