RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 PUS1Q9Y606 427 aaKnown RBP eCLIP7.27□□□□□ -1.25
NEDD9-215ENST00000514660 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
NEDD9-215ENST00000514660 TMEM189A5PLL7 270 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 HMSDA8MTL9 139 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 CST7O76096 145 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 CD5P06127 495 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 METTL15P1P0C7V9 234 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 DNAH10OSP0CZ25 163 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 PET100P0DJ07 73 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 RPL12P30050 165 aaKnown RBP7.26□□□□□ -1.25
NEDD9-215ENST00000514660 CAV2P51636 162 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 MFAP4P55083 255 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 RPP30P78346 268 aaKnown RBP7.26□□□□□ -1.25
NEDD9-215ENST00000514660 ZNF709Q8N972 641 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 SYT8Q8NBV8 401 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 RNF141Q8WVD5 230 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 UHRF2Q96PU4 802 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 FNDC4Q9H6D8 234 aaPredicted RBP7.26□□□□□ -1.25
NEDD9-215ENST00000514660 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
NEDD9-215ENST00000514660 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
NEDD9-215ENST00000514660 RNF222A6NCQ9 220 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 MT-CO2P00403 227 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 CXCL2P19875 107 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 SULT1A1P50225 295 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 LINC00315P59091 139 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 DAD1P61803 113 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 LGALSLQ3ZCW2 172 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-215ENST00000514660 ACOT7LQ6ZUV0 252 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 NOXA1Q86UR1 476 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 AQP10Q96PS8 301 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 C1QTNF4Q9BXJ3 329 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 SLC25A31Q9H0C2 315 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 WFDC1Q9HC57 220 aa7.25□□□□□ -1.25
NEDD9-215ENST00000514660 PAIP2BQ9ULR5 123 aaKnown RBP7.25□□□□□ -1.25
NEDD9-215ENST00000514660 LOC102723971A0A1B0GUV8 181 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 ARPC5O15511 151 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 IGKV3-20P01619 116 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 GPX4P36969 197 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-215ENST00000514660 EIF2B2P49770 351 aaKnown RBP7.24□□□□□ -1.25
NEDD9-215ENST00000514660 CCL18P55774 89 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 RAB11AP62491 216 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 ZFP69Q49AA0 526 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 RNASEH2CQ8TDP1 164 aaKnown RBP7.24□□□□□ -1.25
NEDD9-215ENST00000514660 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 GINS3Q9BRX5 216 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 HSPB11Q9Y547 144 aa7.24□□□□□ -1.25
NEDD9-215ENST00000514660 HELTA6NFD8 242 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 BOLA2-SMG1P6H3BVE0 249 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 GNG7O60262 68 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 HLA-DRB4P13762 266 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 CRYBB3P26998 211 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 S100A11P31949 105 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 NKX2-5P52952 324 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-215ENST00000514660 USF2Q15853 346 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-215ENST00000514660 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 KCNRGQ8N5I3 272 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 INO80EQ8NBZ0 244 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-215ENST00000514660 OR10P1Q8NGE3 313 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 PINX1Q96BK5 328 aaKnown RBP7.23□□□□□ -1.25
NEDD9-215ENST00000514660 TXN2Q99757 166 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 SLC35B3Q9H1N7 401 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 U3KQE9 123 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 HLA-DRB4X5D2U9 266 aa7.23□□□□□ -1.25
NEDD9-215ENST00000514660 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 PLAC8L1A1L4L8 177 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 F5H768 121 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 CYB5BO43169 146 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-215ENST00000514660 AP2S1P53680 142 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-215ENST00000514660 BAXQ07812 192 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 SLC38A11Q08AI6 406 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 OR2F1Q13607 317 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 GAMTQ14353 236 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 ATP6V1FQ16864 119 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 ZNF600Q6ZNG1 722 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 TMUB2Q71RG4 321 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 STX12Q86Y82 276 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 C9orf62Q8N4C0 152 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 OR5C1Q8NGR4 320 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 GLMPQ8WWB7 406 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 SMIM3Q9BZL3 60 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 CYTL1Q9NRR1 136 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 FAM30AQ9NZY2 134 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 DNAH8Q96JB1 4490 aa7.22□□□□□ -1.25
NEDD9-215ENST00000514660 A0A0D9SG52 128 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 CORTO00230 105 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 NPPCP23582 126 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 OPRK1P41145 380 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 ZNF345Q14585 488 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 CLINT1Q14677 625 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 ESRGQ1W209 222 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 VWC2Q2TAL6 325 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 ETFRF1Q6IPR1 90 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms