RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
VCAN-211ENST00000513984 FABP9Q0Z7S8 132 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 HIST2H2BCQ6DN03 193 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 Q86TA4 180 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
VCAN-211ENST00000513984 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 BUB3O43684 328 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 PSG9Q00887 426 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 Q6YL49 198 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 GOLT1AQ6ZVE7 132 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 TMEM75Q8N9X5 138 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
VCAN-211ENST00000513984 NBPF19A0A087WUL8 3843 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 ARL6IP6Q8N6S5 226 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 PRDM13Q9H4Q3 707 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 A0A087X0K7 114 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.53□□□□□ -0.56
VCAN-211ENST00000513984 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 ZNF705GA8MUZ8 300 aaPredicted RBP11.53□□□□□ -0.56
VCAN-211ENST00000513984 DIRC3C9JPN6 131 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 ARL3P36405 182 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 C1orf194Q5T5A4 169 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 TMEM183AQ8IXX5 376 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 U3KQE9 123 aa11.53□□□□□ -0.56
VCAN-211ENST00000513984 TRAV8-1A0A0A6YYK1 113 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 K7EQM0 130 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 GATCO43716 136 aaKnown RBP11.52□□□□□ -0.57
VCAN-211ENST00000513984 PF4V1P10720 104 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 HOXA5P20719 270 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 NDUFA6P56556 154 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 METTL26Q96S19 204 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 KLK15Q9H2R5 256 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 SERTAD4Q9NUC0 356 aa11.52□□□□□ -0.57
VCAN-211ENST00000513984 SERTM2A0A1B0GWG4 89 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 M0R3E3 92 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 PSG3Q16557 428 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
VCAN-211ENST00000513984 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 AKR1D1P51857 326 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 TMEM95Q3KNT9 176 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 WFDC11Q8NEX6 87 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
VCAN-211ENST00000513984 ITPR3Q14573 2671 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 NDUFA4O00483 81 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 TRBV12-3P01733 135 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 IGHG4P01861 327 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
VCAN-211ENST00000513984 PRNTQ86SH4 94 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 PRSS22Q9GZN4 317 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
VCAN-211ENST00000513984 ZFP30Q9Y2G7 519 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
VCAN-211ENST00000513984 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 CSN1S1P47710 185 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 LINC00322Q6ZN03 302 aaPredicted RBP11.49□□□□□ -0.57
VCAN-211ENST00000513984 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 CA1P00915 261 aaPredicted RBP11.49□□□□□ -0.57
VCAN-211ENST00000513984 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
VCAN-211ENST00000513984 PSMB8P28062 276 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 CDX1P47902 265 aaPredicted RBP11.49□□□□□ -0.57
VCAN-211ENST00000513984 TCL1AP56279 114 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 CT83Q5H943 113 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 CIARTQ8N365 385 aaPredicted RBP11.49□□□□□ -0.57
VCAN-211ENST00000513984 OR4X2Q8NGF9 303 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 TSKUQ8WUA8 353 aa11.49□□□□□ -0.57
VCAN-211ENST00000513984 IZUMO1RA6ND01 250 aa11.48□□□□□ -0.57
VCAN-211ENST00000513984 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
VCAN-211ENST00000513984 SLC50A1Q9BRV3 221 aa11.48□□□□□ -0.57
VCAN-211ENST00000513984 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
VCAN-211ENST00000513984 FBLL1A6NHQ2 334 aaKnown RBP11.47□□□□□ -0.57
VCAN-211ENST00000513984 ZNF785A8K8V0 405 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 HOXA3O43365 443 aaPredicted RBP11.47□□□□□ -0.57
VCAN-211ENST00000513984 ZNF207O43670 478 aaKnown RBP11.47□□□□□ -0.57
VCAN-211ENST00000513984 S100A8P05109 93 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 MEOX2P50222 304 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 COX19Q49B96 90 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 COA6Q5JTJ3 125 aaKnown RBP11.47□□□□□ -0.57
VCAN-211ENST00000513984 LCNL1Q6ZST4 164 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
VCAN-211ENST00000513984 ZNF469Q96JG9 3925 aaPredicted RBP11.47□□□□□ -0.57
VCAN-211ENST00000513984 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 CHEK1O14757 476 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 P01737 135 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 CBLN1P23435 193 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 C16orf54Q6UWD8 224 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.57
VCAN-211ENST00000513984 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
VCAN-211ENST00000513984 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms