RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 RPS20P60866 119 aaKnown RBP7.71□□□□□ -1.17
VCAN-210ENST00000513960 TWIST1Q15672 202 aa7.71□□□□□ -1.17
VCAN-210ENST00000513960 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.17
VCAN-210ENST00000513960 C1RLQ9NZP8 487 aa7.71□□□□□ -1.17
VCAN-210ENST00000513960 SOX21Q9Y651 276 aaPredicted RBP7.71□□□□□ -1.17
VCAN-210ENST00000513960 ZFHX2Q9C0A1 2572 aaPredicted RBP7.71□□□□□ -1.17
VCAN-210ENST00000513960 A0A1W2PPM0 123 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 C17orf100A8MU93 164 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 CNIH1O95406 144 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 DIAPH2-AS1Q14236 149 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 POU2AF1Q16633 256 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 CCL17Q92583 94 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 LINC01545Q5VT33 79 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 TEX36Q5VZQ5 186 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 GFRALQ6UXV0 394 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 SPTBN2O15020 2390 aa7.71□□□□□ -1.18
VCAN-210ENST00000513960 A0A0G2JNJ9 132 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 FCGR2BP31994 310 aaPredicted RBP7.7□□□□□ -1.18
VCAN-210ENST00000513960 NEU4Q8WWR8 484 aaPredicted RBP7.7□□□□□ -1.18
VCAN-210ENST00000513960 IFI27L1Q96BM0 104 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 Q9UFV3 132 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 ZGRF1Q86YA3 2104 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 A0A1B0GV72 72 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 M0R3E3 92 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 RBPJQ06330 500 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 BSPH1Q075Z2 132 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 Q86TA4 180 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 NPFFR1Q9GZQ6 430 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 TMEM189A5PLL7 270 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 NDUFB3O43676 98 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 ARL3P36405 182 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 ADIPOQQ15848 244 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 AMTNQ6UX39 209 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 GTSCR1Q86UQ5 136 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 DKK2Q9UBU2 259 aa7.7□□□□□ -1.18
VCAN-210ENST00000513960 OSR1Q8TAX0 266 aaPredicted RBP7.69□□□□□ -1.18
VCAN-210ENST00000513960 LINC00574Q9H8X3 128 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 DYNLRB1Q9NP97 96 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 TMEM160Q9NX00 188 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 FNDC10F2Z333 226 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 CLEC3BP05452 202 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 EVI2AP22794 236 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 RPL27AP46776 148 aaKnown RBP7.69□□□□□ -1.18
VCAN-210ENST00000513960 DLX1P56177 255 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 ATP5IP56385 69 aaPredicted RBP7.69□□□□□ -1.18
VCAN-210ENST00000513960 ETDBQ3ZM63 59 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 CLUHP3Q96NS8 147 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 HBDP02042 147 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 BOD1L1Q8NFC6 3051 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 OR4X2Q8NGF9 303 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 OR4C13Q8NGP0 309 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 NGBQ9NPG2 151 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 CRXO43186 299 aaPredicted RBP7.69□□□□□ -1.18
VCAN-210ENST00000513960 ORM1P02763 201 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 SH2D6Q7Z4S9 175 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 ORMDL3Q8N138 153 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 FOXC2Q99958 501 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 NDUFA4L2Q9NRX3 87 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 SIGLEC8Q9NYZ4 499 aa7.69□□□□□ -1.18
VCAN-210ENST00000513960 CFAP47Q6ZTR5 3102 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 IGHV3OR16-8A0A075B7F1 116 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 PPIFP30405 207 aaKnown RBP7.68□□□□□ -1.18
VCAN-210ENST00000513960 C17orf77Q96MU5 243 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 AKAP6Q13023 2319 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 ASPMQ8IZT6 3477 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 A0A1W2PPI3 338 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 FXYD2P54710 66 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 TCF15Q12870 199 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 TMEM200BQ69YZ2 307 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 COX7A1P24310 79 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 ZNF833PQ6ZTB9 187 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 OR9G4Q8NGQ1 327 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 ARPC1AQ92747 370 aa7.68□□□□□ -1.18
VCAN-210ENST00000513960 DSCAML1Q8TD84 2053 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 C22orf46C9J442 243 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 AAMDCQ9H7C9 122 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 IGHV3-35A0A0C4DH35 117 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 TMEM178BH3BS89 294 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 LTAP01374 205 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 KLK15Q9H2R5 256 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 MED13LQ71F56 2210 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 H3BMG7 143 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 LEPP41159 167 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 CKS1BP61024 79 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 WFDC2Q14508 124 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 RUSC1-AS1Q66K80 236 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 MGAQ8IWI9 3026 aa7.67□□□□□ -1.18
VCAN-210ENST00000513960 HAX1O00165 279 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 TGFAP01135 160 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms