RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PAFAH1B2P68402 229 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 ZFP69Q49AA0 526 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 PSMG4Q5JS54 123 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 C20orf173Q96LM9 149 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 ASCL2Q99929 193 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 ZNF471Q9BX82 626 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 SLC25A2Q9BXI2 301 aa7.28□□□□□ -1.24
TOPBP1-209ENST00000513818 BORCS7-ASMTA0A0B4J1R7 106 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 H3BQ15 152 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 SLC17A3O00476 420 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 CD5P06127 495 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 RPL7P18124 248 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 LGALSLQ3ZCW2 172 aaPredicted RBP7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 SSX7Q7RTT5 188 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 RNF182Q8N6D2 247 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 GATAD1Q8WUU5 269 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 LINC00052Q96N35 136 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 TUBA4BQ9H853 241 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 FUT9Q9Y231 359 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 TIMM9Q9Y5J7 89 aa7.27□□□□□ -1.25
TOPBP1-209ENST00000513818 TRAV2A0A0B4J234 112 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 A0A0D9SG52 128 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 RBMY1BA6NDE4 496 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 RBMY1EA6NEQ0 496 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 F6UB75 175 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 TAAR5O14804 337 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 OR10J4P0C629 311 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 RBMY1DP0C7P1 496 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 IGLC2P0DOY2 106 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 S100A7P31151 101 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 ACOT6Q3I5F7 207 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 BPIFA4PQ86YQ2 179 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 C9orf62Q8N4C0 152 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 OR10G4Q8NGN3 311 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 OR10G9Q8NGN4 311 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 OR10G7Q8NGN6 311 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 OR2G3Q8NGZ4 309 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 BLNKQ8WV28 456 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 GPR82Q96P67 336 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 PSMG3Q9BT73 122 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
TOPBP1-209ENST00000513818 A0A087X0K7 114 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 OR7C2O60412 319 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 JTBO76095 146 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 M6PRP20645 277 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 PSMB3P49720 205 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 RHOBP62745 196 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 GDF5OSQ5U4N7 250 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 S100A7AQ86SG5 101 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 HYLS1Q96M11 299 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 MRPL32Q9BYC8 188 aaKnown RBP7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 RETNQ9HD89 108 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 RPRMQ9NS64 109 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 X6R8D5 127 aa7.25□□□□□ -1.25
TOPBP1-209ENST00000513818 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 BOLA2-SMG1P6H3BVE0 249 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 IGKV3-20P01619 116 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF705DP0CH99 300 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF705BP0CI00 300 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 CDC34P49427 236 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 MEOX2P50222 304 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 SNRPD3P62318 126 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 UBE2L3P68036 154 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 TMEM41BQ5BJD5 291 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 SBSPONQ8IVN8 264 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 LRRC20Q8TCA0 184 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 FXYD5Q96DB9 178 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 GNPNAT1Q96EK6 184 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 PHYHIPLQ96FC7 376 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 PAXXQ9BUH6 204 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 AGRNO00468 2067 aa7.24□□□□□ -1.25
TOPBP1-209ENST00000513818 A0A1W2PPV4 95 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 ISLRO14498 428 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 SPP1P10451 314 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 ID1P41134 155 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 FHITP49789 147 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 KHDC3LQ587J8 217 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 AKR1C8PQ5T2L2 129 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 LCN15Q6UWW0 184 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF738Q8NE65 137 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 TMED6Q8WW62 240 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 OR51M1Q9H341 326 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 HRH4Q9H3N8 390 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF331Q9NQX6 463 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
TOPBP1-209ENST00000513818 TRBV19A0A075B6N1 114 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 LOC102724200A0A096LPH7 203 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 A8MZ25 164 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 M0R3E3 92 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms