RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PATE2Q6UY27 113 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 TMEM256Q8N2U0 113 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 HYPMO75409 117 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 RPL7P18124 248 aaKnown RBP8.86□□□□□ -0.99
VEGFA-216ENST00000512683 CNN1P51911 297 aaKnown RBP8.86□□□□□ -0.99
VEGFA-216ENST00000512683 SELENOTP62341 195 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 OR11H7Q8NGC8 314 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 OR10P1Q8NGE3 313 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 SEC22CQ9BRL7 303 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 C11orf1Q9H5F2 150 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
VEGFA-216ENST00000512683 CRXO43186 299 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-216ENST00000512683 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 OR5G3P0C626 314 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
VEGFA-216ENST00000512683 CCL18P55774 89 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 TAS2R60P59551 318 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 RAP2BP61225 183 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 ZNF431Q8TF32 576 aaPredicted RBP8.85□□□□□ -0.99
VEGFA-216ENST00000512683 CCDC32Q9BV29 185 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 ARL6Q9H0F7 186 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 PKD1P98161 4303 aa8.85□□□□□ -0.99
VEGFA-216ENST00000512683 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 AGPAT2O15120 278 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 MRPS12O15235 138 aaKnown RBP8.84□□□□□ -0.99
VEGFA-216ENST00000512683 ATP5G1P05496 136 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 ATP5G3P48201 142 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 MGAT4CQ9UBM8 478 aa8.84□□□□□ -0.99
VEGFA-216ENST00000512683 A0A087X0K7 114 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 ZNF705GA8MUZ8 300 aaPredicted RBP8.83□□□□□ -1
VEGFA-216ENST00000512683 H2AFB2P0C5Z0 115 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 FGL1Q08830 312 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 IL15RAQ13261 267 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 ZNF846Q147U1 533 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 PXDC1Q5TGL8 231 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 C6orf223Q8N319 242 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 C12orf45Q8N5I9 185 aaPredicted RBP8.83□□□□□ -1
VEGFA-216ENST00000512683 ZNF503Q96F45 646 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 MGST2Q99735 147 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 C20orf144Q9BQM9 153 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 ARV1Q9H2C2 271 aa8.83□□□□□ -1
VEGFA-216ENST00000512683 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
VEGFA-216ENST00000512683 C5orf51A6NDU8 294 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 FAM25EA8MYX2 175 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 F5H768 121 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 BOLA2-SMG1P6H3BVE0 249 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 M0R2Z0 102 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 GOSR2O14653 212 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 DEFB130BP0DP73 79 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 DEFB130AP0DP74 79 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 CXCL3P19876 107 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 SPINK13Q1W4C9 94 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 MORN5Q5VZ52 161 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 ZNF546Q86UE3 836 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 ZNF575Q86XF7 245 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 OR8A1Q8NGG7 326 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 OR10J6PQ8NGY7 276 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 TMEM37Q8WXS4 190 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 C2orf50Q96LR7 162 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 LINC01587Q99440 93 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 PPP1R14DQ9NXH3 145 aa8.82□□□□□ -1
VEGFA-216ENST00000512683 LSM5Q9Y4Y9 91 aaKnown RBP8.82□□□□□ -1
VEGFA-216ENST00000512683 PLAC8L1A1L4L8 177 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 FAM24AA6NFZ4 105 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 C16orf90A8MZG2 172 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 L7N2F9 121 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 CST7O76096 145 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 PRM2P04554 102 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 PRB4P10163 310 aaPredicted RBP8.81□□□□□ -1
VEGFA-216ENST00000512683 CXCL2P19875 107 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 VAMP2P63027 116 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 PSG3Q16557 428 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 ZNF738Q8NE65 137 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 LRRC20Q8TCA0 184 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 C16orf74Q96GX8 76 aa8.81□□□□□ -1
VEGFA-216ENST00000512683 FAM240BA0A1B0GVZ2 78 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 H3BNG1 76 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 H7BYZ3 331 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 NUDT3O95989 172 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 CDKN1BP46527 198 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 BCAP31P51572 246 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 CAV2P51636 162 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 RHOBP62745 196 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 TNP2Q05952 138 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 ASAH1Q13510 395 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 VWC2Q2TAL6 325 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 TTC32Q5I0X7 151 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 WDR83OSQ9Y284 106 aa8.8□□□□□ -1
VEGFA-216ENST00000512683 MUC4Q99102 2169 aa8.79□□□□□ -1
VEGFA-216ENST00000512683 NACAE9PAV3 2078 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms