RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ORM2P19652 201 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 AKR1C1Q04828 323 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 C21orf62-AS1Q17RA5 79 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 PYDC2Q56P42 97 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 GSG1LQ6UXU4 331 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 C1orf158Q8N1D5 194 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 C15orf53Q8NAA6 179 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 MCFD2Q8NI22 146 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 SCRT1Q9BWW7 348 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 SLIRPQ9GZT3 109 aaKnown RBP5.1□□□□□ -1.59
USP46-208ENST00000512656 SLC25A32Q9H2D1 315 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 SLC25A22Q9H936 323 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
USP46-208ENST00000512656 STRAPQ9Y3F4 350 aaKnown RBP5.1□□□□□ -1.59
USP46-208ENST00000512656 YTHDF2Q9Y5A9 579 aaKnown RBP5.1□□□□□ -1.59
USP46-208ENST00000512656 PKD1P98161 4303 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 IGLV2-18A0A075B6J9 118 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 IGKV1OR2-108A0A075B7D4 117 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 A8MTW9 85 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 SFT2D2O95562 160 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 RPL7P18124 248 aaKnown RBP5.09□□□□□ -1.59
USP46-208ENST00000512656 UBE2MP61081 183 aaKnown RBP5.09□□□□□ -1.59
USP46-208ENST00000512656 RAP2BP61225 183 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 SELENOTP62341 195 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 SPANXN5Q5MJ07 72 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 TMEM88Q6PEY1 159 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 ATG101Q9BSB4 218 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 FAM30AQ9NZY2 134 aa5.09□□□□□ -1.59
USP46-208ENST00000512656 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 SMCO3A2RU48 225 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 H3BMQ9 156 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 HYPMO75409 117 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 IL5P05113 134 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 HOXB5P09067 269 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 TSPOP30536 169 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 S100A5P33763 92 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 CNN1P51911 297 aaKnown RBP5.08□□□□□ -1.6
USP46-208ENST00000512656 FGL1Q08830 312 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 PPP1R1AQ13522 171 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 C1orf134Q5TEV5 83 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 AMTNQ6UX39 209 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 Q6ZR54 194 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 ACOT7LQ6ZUV0 252 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 TMEM144Q7Z5S9 345 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 TMEM256Q8N2U0 113 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 ZNF738Q8NE65 137 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 OR11H7Q8NGC8 314 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 LRRC20Q8TCA0 184 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 TRIM63Q969Q1 353 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 PPP1R14DQ9NXH3 145 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
USP46-208ENST00000512656 ZNF705GA8MUZ8 300 aaPredicted RBP5.07□□□□□ -1.6
USP46-208ENST00000512656 PRSS46E5RG02 174 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 H3BP45 60 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 H3BRN7 92 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 BOLA2-SMG1P6H3BVE0 249 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 M0R2Z0 102 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 OR5G3P0C626 314 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 LINC00869P0C866 280 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 GATA2P23769 480 aaPredicted RBP5.07□□□□□ -1.6
USP46-208ENST00000512656 INPP1P49441 399 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 RHOBP62745 196 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 FOXI1Q12951 378 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 SPINK13Q1W4C9 94 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 CYP2G1PQ6ZSU1 146 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 SHANK2-AS3Q9BTD1 123 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 SLC25A39Q9BZJ4 359 aaPredicted RBP5.07□□□□□ -1.6
USP46-208ENST00000512656 PSENENQ9NZ42 101 aa5.07□□□□□ -1.6
USP46-208ENST00000512656 C9orf170A2RU37 121 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 NAP1L6A6NFF2 107 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 CBY3A6NI87 242 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 FNDC10F2Z333 226 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 F5H768 121 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 ATP5G1P05496 136 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 ANXA7P20073 488 aaKnown RBP5.06□□□□□ -1.6
USP46-208ENST00000512656 ATP5G3P48201 142 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 PLP1P60201 277 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 DLK1P80370 383 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 HIST1H1AQ02539 215 aaPredicted RBP5.06□□□□□ -1.6
USP46-208ENST00000512656 PSG3Q16557 428 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 SPANXN2Q5MJ10 180 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 PXDC1Q5TGL8 231 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 RNF182Q8N6D2 247 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 OR8A1Q8NGG7 326 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 LINC01587Q99440 93 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 NPVFQ9HCQ7 196 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 MGAT4CQ9UBM8 478 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 V9GYH0 126 aa5.06□□□□□ -1.6
USP46-208ENST00000512656 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
USP46-208ENST00000512656 MUC4Q99102 2169 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 A0A087X0K7 114 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 TRAV8-2A0A0B4J237 113 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CCDC160A6NGH7 325 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 K7EPK0 472 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 GOSR2O14653 212 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CRXO43186 299 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms