RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 NMES1Q9C002 83 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
DDX41-213ENST00000512027 KLK5Q9Y337 293 aaPredicted RBP11.88□□□□□ -0.51
DDX41-213ENST00000512027 ZNF705FA8MVS1 300 aaPredicted RBP11.87□□□□□ -0.51
DDX41-213ENST00000512027 SLC17A3O00476 420 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 SSNA1O43805 119 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 CXCL3P19876 107 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 S100A11P31949 105 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 HBG1P69891 147 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 HBG2P69892 147 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 SPATA31B1PQ5VZV4 182 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 Q6ZTC4 211 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 LRRC20Q8TCA0 184 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
DDX41-213ENST00000512027 A8MTW9 85 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 M0R2Z0 102 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 EMP1P54849 157 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 RAB31Q13636 194 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 SPINK13Q1W4C9 94 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 OR11H7Q8NGC8 314 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 OR5C1Q8NGR4 320 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 SLC39A9Q9NUM3 307 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 PXMP4Q9Y6I8 212 aa11.86□□□□□ -0.51
DDX41-213ENST00000512027 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 E5RGE8 158 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 RLN2P04090 185 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 B2MP61769 119 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
DDX41-213ENST00000512027 CLINT1Q14677 625 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 PSG3Q16557 428 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 GCSAMLQ5JQS6 135 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 Q6ZRG5 221 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 S100A7AQ86SG5 101 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 PPP1R1CQ8WVI7 109 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 HRH4Q9H3N8 390 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
DDX41-213ENST00000512027 H3BQ15 152 aa11.84□□□□□ -0.51
DDX41-213ENST00000512027 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
DDX41-213ENST00000512027 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
DDX41-213ENST00000512027 BAP18Q8IXM2 172 aa11.84□□□□□ -0.51
DDX41-213ENST00000512027 NPCDR1Q9BY65 106 aa11.84□□□□□ -0.51
DDX41-213ENST00000512027 ZNF331Q9NQX6 463 aaPredicted RBP11.84□□□□□ -0.51
DDX41-213ENST00000512027 KMT2AQ03164 3969 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 CRXO43186 299 aaPredicted RBP11.83□□□□□ -0.52
DDX41-213ENST00000512027 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
DDX41-213ENST00000512027 PRM2P04554 102 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 OR8A1Q8NGG7 326 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 OR1L4Q8NGR5 311 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 C2CD4CQ8TF44 421 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
DDX41-213ENST00000512027 NEU1Q99519 415 aa11.83□□□□□ -0.52
DDX41-213ENST00000512027 IGLL5B9A064 214 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 PRAC2D3DTV9 90 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 RHOBP62745 196 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 CYCSP99999 105 aaKnown RBP11.82□□□□□ -0.52
DDX41-213ENST00000512027 IGF2BP2-AS1Q96M15 143 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 PFDN5Q99471 154 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 RNF126Q9BV68 326 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 GOLT1BQ9Y3E0 138 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 ALG5Q9Y673 324 aa11.82□□□□□ -0.52
DDX41-213ENST00000512027 MPC2O95563 127 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 CXCL2P19875 107 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 PARD6GQ9BYG4 376 aaPredicted RBP11.81□□□□□ -0.52
DDX41-213ENST00000512027 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 RNF24Q9Y225 148 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 RFNGQ9Y644 331 aa11.81□□□□□ -0.52
DDX41-213ENST00000512027 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 BOLA2-SMG1P6H3BVE0 249 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 HBE1P02100 147 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 PYYP10082 97 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 CHAC2Q8WUX2 184 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 SAT2Q96F10 170 aaPredicted RBP11.8□□□□□ -0.52
DDX41-213ENST00000512027 TMEM208Q9BTX3 173 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 SMIM3Q9BZL3 60 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
DDX41-213ENST00000512027 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
DDX41-213ENST00000512027 MPDU1O75352 247 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 INSP01308 110 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 FAM222AQ5U5X8 452 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 WDR61Q9GZS3 305 aaKnown RBP11.79□□□□□ -0.52
DDX41-213ENST00000512027 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
DDX41-213ENST00000512027 RRN3P1Q2M238 152 aa11.78□□□□□ -0.52
DDX41-213ENST00000512027 MIR17HGQ75NE6 70 aa11.78□□□□□ -0.52
DDX41-213ENST00000512027 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
DDX41-213ENST00000512027 PPP1R14DQ9NXH3 145 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms