RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 NDUFA11Q86Y39 141 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 CYB561D1Q8N8Q1 229 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 GRAMD2BQ96HH9 432 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 YTHDF2Q9Y5A9 579 aaKnown RBP6.98□□□□□ -1.29
NR1I3-228ENST00000511676 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
NR1I3-228ENST00000511676 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
NR1I3-228ENST00000511676 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 C9JCJ5 164 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 APOC3P02656 99 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
NR1I3-228ENST00000511676 OR10J4P0C629 311 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 PSG9Q00887 426 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 KPRPQ5T749 579 aaPredicted RBP6.97□□□□□ -1.29
NR1I3-228ENST00000511676 MRAPQ8TCY5 172 aa6.97□□□□□ -1.29
NR1I3-228ENST00000511676 TRRAPQ9Y4A5 3859 aa6.96□□□□□ -1.29
NR1I3-228ENST00000511676 TRBV6-1A0A0K0K1D8 114 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 PYYP10082 97 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 ATP5G3P48201 142 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 TAS2R60P59551 318 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 UBE2G2P60604 165 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 C1QL4Q86Z23 238 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 OR8I2Q8N0Y5 310 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
NR1I3-228ENST00000511676 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 MCRIP2Q9BUT9 160 aaKnown RBP6.96□□□□□ -1.3
NR1I3-228ENST00000511676 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-228ENST00000511676 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 HELTA6NFD8 242 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 H3BQ15 152 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-228ENST00000511676 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
NR1I3-228ENST00000511676 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
NR1I3-228ENST00000511676 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-228ENST00000511676 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 LINC01619G3V211 115 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 K7EQM0 130 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 PEX7O00628 323 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
NR1I3-228ENST00000511676 NDUFB4O95168 129 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
NR1I3-228ENST00000511676 FHL3Q13643 280 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
NR1I3-228ENST00000511676 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 C10orf99Q6UWK7 81 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 SIGLEC15Q6ZMC9 328 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 FMC1Q96HJ9 113 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 C20orf24Q9BUV8 137 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 Q9H3A6 140 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 SDF2L1Q9HCN8 221 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
NR1I3-228ENST00000511676 TGP01266 2768 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 WNK1Q9H4A3 2382 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 PGPA6NDG6 321 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
NR1I3-228ENST00000511676 HOXD3P31249 432 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-228ENST00000511676 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
NR1I3-228ENST00000511676 GUCA2BQ16661 112 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 CMTM2Q8TAZ6 248 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-228ENST00000511676 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NR1I3-228ENST00000511676 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
NR1I3-228ENST00000511676 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
NR1I3-228ENST00000511676 TSPAN4O14817 238 aa6.92□□□□□ -1.3
NR1I3-228ENST00000511676 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
NR1I3-228ENST00000511676 PF4P02776 101 aa6.92□□□□□ -1.3
NR1I3-228ENST00000511676 TCRAP04437 139 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms