RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 LINC00052Q96N35 136 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 PBDC1Q9BVG4 233 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 TMEM222Q9H0R3 208 aa4.66□□□□□ -1.66
COPS4-209ENST00000511653 YTHDF2Q9Y5A9 579 aaKnown RBP4.66□□□□□ -1.66
COPS4-209ENST00000511653 CEBPZOSA8MTT3 80 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 GSTZ1O43708 216 aaPredicted RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 CDK2AP2O75956 126 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 ATG12O94817 140 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 RD3LP0DJH9 198 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 VBP1P61758 197 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 SNRPEP62304 92 aaKnown RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 ZNF79Q15937 498 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 SCGB2B2Q4G0G5 96 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 FAM78BQ5VT40 261 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 FOXI2Q6ZQN5 318 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 SELENOHQ8IZQ5 122 aaKnown RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 CCDC71LQ8N9Z2 235 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 OR52E5Q8NH55 327 aa4.65□□□□□ -1.66
COPS4-209ENST00000511653 RTBDNQ9BSG5 229 aaPredicted RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 SLIRPQ9GZT3 109 aaKnown RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.65□□□□□ -1.66
COPS4-209ENST00000511653 IGKV1D-37A0A075B6S9 117 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 TEX48A0A1B0GUV7 120 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 HBE1P02100 147 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 PSMB3P49720 205 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 DAD1P61803 113 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 ZNF90Q03938 601 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 PNRC1Q12796 327 aaPredicted RBP4.64□□□□□ -1.67
COPS4-209ENST00000511653 NMSQ5H8A3 153 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 FAM219AQ8IW50 185 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 TERB2Q8NHR7 220 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 COQ8AQ8NI60 647 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 RBPMSQ93062 196 aaKnown RBP4.64□□□□□ -1.67
COPS4-209ENST00000511653 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 NAA60Q9H7X0 242 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 MTFP1Q9UDX5 166 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 GOLT1BQ9Y3E0 138 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 A0A0J9YX75 114 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 TEX13DA0A0J9YY54 714 aaPredicted RBP4.64□□□□□ -1.67
COPS4-209ENST00000511653 NBDYA0A0U1RRE5 68 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 FAM25AB3EWG3 89 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 FAM25CB3EWG5 89 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 FAM25GB3EWG6 89 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 B3GALNT1O75752 331 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 UPK1BO75841 260 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 RAB3DO95716 219 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 PTTG1O95997 202 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 VPREB1P12018 145 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 PAX9P55771 341 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 LYZP61626 148 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 PSG9Q00887 426 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 RRN3P1Q2M238 152 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 AMTNQ6UX39 209 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 SLC7A5P1Q8MH63 180 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 ZNRF2Q8NHG8 242 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 ZFAND1Q8TCF1 268 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 C7orf50Q9BRJ6 194 aaKnown RBP4.64□□□□□ -1.67
COPS4-209ENST00000511653 EXTL2Q9UBQ6 330 aa4.64□□□□□ -1.67
COPS4-209ENST00000511653 CRYM-AS1A6NIL9 109 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 A8MTW9 85 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 ZNF705GA8MUZ8 300 aaPredicted RBP4.63□□□□□ -1.67
COPS4-209ENST00000511653 M0R2Z0 102 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 TBPP20226 339 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 ID1P41134 155 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 SUPT4H1P63272 117 aaKnown RBP4.63□□□□□ -1.67
COPS4-209ENST00000511653 OR2F1Q13607 317 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 GAMTQ14353 236 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 OR8G2PQ6IF36 304 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 ETFRF1Q6IPR1 90 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 STEAP1BQ6NZ63 245 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 TMEM229BQ8NBD8 167 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 TMED3Q9Y3Q3 217 aa4.63□□□□□ -1.67
COPS4-209ENST00000511653 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 IGKV1OR2-108A0A075B7D4 117 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 PLAC8L1A1L4L8 177 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 ZFP92A6NM28 416 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 ISLRO14498 428 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 CRXO43186 299 aaPredicted RBP4.62□□□□□ -1.67
COPS4-209ENST00000511653 SULT1A3P0DMM9 295 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 SULT1A4P0DMN0 295 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 NUP62P37198 522 aaPredicted RBP4.62□□□□□ -1.67
COPS4-209ENST00000511653 TAS2R19P59542 299 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 FCN2Q15485 313 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 SPINK13Q1W4C9 94 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 VWC2Q2TAL6 325 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 AKAP14Q86UN6 197 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 BAP18Q8IXM2 172 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 LGI3Q8N145 548 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 C15orf53Q8NAA6 179 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 OR4C16Q8NGL9 310 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 DTD1Q8TEA8 209 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 IGF2BP2-AS1Q96M15 143 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 ATG101Q9BSB4 218 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 TMEM208Q9BTX3 173 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 MAGT1Q9H0U3 335 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 MIXL1Q9H2W2 232 aa4.62□□□□□ -1.67
COPS4-209ENST00000511653 RBKSQ9H477 322 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms