RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 FRMPD1Q5SYB0 1578 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 COL24A1Q17RW2 1714 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 CECR2Q9BXF3 1484 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 C17orf112F2Z3M2 114 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 NUPR1O60356 82 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 IFNA14P01570 189 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 OR10J4P0C629 311 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 RAB5CP51148 216 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 TCTAP57738 103 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 EIF3IQ13347 325 aaKnown RBP0.7□□□□□ -2.3
CHD1-207ENST00000511628 C1orf140Q5VVS0 124 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 C3orf33Q6P1S2 294 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 C2orf82Q6UX34 121 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 GRINAQ7Z429 371 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 STX19Q8N4C7 294 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 NUP35Q8NFH5 326 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 HYLS1Q96M11 299 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 BOLA2Q9H3K6 86 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 OTORQ9NRC9 128 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 V9GYQ6 96 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 UNC13CQ8NB66 2214 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 PHRF1Q9P1Y6 1649 aaKnown RBP0.7□□□□□ -2.3
CHD1-207ENST00000511628 RFX7Q2KHR2 1363 aa0.7□□□□□ -2.3
CHD1-207ENST00000511628 LAMA4Q16363 1823 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 TRPM1Q7Z4N2 1603 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 RER1O15258 196 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 CXCL8P10145 99 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 SERPINB1P30740 379 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 PSG9Q00887 426 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 KLRD1Q13241 179 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 LINC00322Q6ZN03 302 aaPredicted RBP0.69□□□□□ -2.3
CHD1-207ENST00000511628 IFT20Q8IY31 132 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.69□□□□□ -2.3
CHD1-207ENST00000511628 ZNF431Q8TF32 576 aaPredicted RBP0.69□□□□□ -2.3
CHD1-207ENST00000511628 MUCL1Q96DR8 90 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 AMELYQ99218 206 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 TAF9BQ9HBM6 251 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 BIN3Q9NQY0 253 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 TMEM14CQ9P0S9 112 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 MYLKQ15746 1914 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 MYO18AQ92614 2054 aaKnown RBP0.69□□□□□ -2.3
CHD1-207ENST00000511628 PEAK1Q9H792 1746 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 ROCK1Q13464 1354 aa0.69□□□□□ -2.3
CHD1-207ENST00000511628 SNRNP200O75643 2136 aaKnown RBP0.68□□□□□ -2.3
CHD1-207ENST00000511628 OR2T8A6NH00 312 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 C5orf67F2Z3F1 127 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 H7BYZ3 331 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 SYNMO15061 1565 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 HIST1H2BKO60814 126 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 HIST1H2BJP06899 126 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 IDO1P14902 403 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 VBP1P61758 197 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 HBBP68871 147 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 RTL8BQ17RB0 113 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 TRIQKQ629K1 86 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 PHF5AQ7RTV0 110 aaKnown RBP0.68□□□□□ -2.3
CHD1-207ENST00000511628 ARPINQ7Z6K5 226 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 CROCCP2Q86T23 111 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 GKN2Q86XP6 184 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 STX12Q86Y82 276 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 FAM24BQ8N5W8 94 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 Q8N6K4 173 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 RTL8AQ9BWD3 113 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 CENPHQ9H3R5 247 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 MED11Q9P086 117 aa0.68□□□□□ -2.3
CHD1-207ENST00000511628 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 TECPR2O15040 1411 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 KDM6AO15550 1401 aaPredicted RBP0.67□□□□□ -2.3
CHD1-207ENST00000511628 TRAV5A0A0B4J249 113 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 hDV103S1A0JD37 113 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 C9orf170A2RU37 121 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 PPP5D1E7EU14 171 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 F8W1H4 67 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 IFNA4P05014 189 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 EFNA4P52798 201 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 DCUN1D2Q6PH85 259 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 ANGPTL5Q86XS5 388 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 DYDC1Q8WWB3 177 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 PCBD2Q9H0N5 130 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 ATPIF1Q9UII2 106 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 FREM3P0C091 2139 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 CAMSAP2Q08AD1 1489 aa0.67□□□□□ -2.3
CHD1-207ENST00000511628 YTHDC2Q9H6S0 1430 aaKnown RBP0.66□□□□□ -2.3
CHD1-207ENST00000511628 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.66□□□□□ -2.3
CHD1-207ENST00000511628 TRAV27A0A087WT01 109 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 H3BRM9 83 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 GPR31O00270 319 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 NCR3O14931 201 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 FABP1P07148 127 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 TMEM78Q5T7P6 136 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 PRR15Q8IV56 129 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 OR5AS1Q8N127 324 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 ISOC1Q96CN7 298 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 BORCS8Q96FH0 119 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 OR2H1Q9GZK4 316 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 MAP1LC3BQ9GZQ8 125 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 LRTM1Q9HBL6 345 aa0.66□□□□□ -2.3
CHD1-207ENST00000511628 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
CHD1-207ENST00000511628 ADGBQ8N7X0 1667 aa0.65□□□□□ -2.3
CHD1-207ENST00000511628 TET1Q8NFU7 2136 aa0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms