RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 H3BRN7 92 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 UBE2CO00762 179 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 HBE1P02100 147 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 RPL35AP18077 110 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 RPL7P18124 248 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 RPL29P47914 159 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 MEOX2P50222 304 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 SERF2P84101 59 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 ZNF124Q15973 351 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 TMEM41BQ5BJD5 291 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 SAMD13Q5VXD3 122 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 UQCC3Q6UW78 93 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 EIF4E3Q8N5X7 224 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 SCRT1Q9BWW7 348 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 DNAJC4Q9NNZ3 241 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 TREM1Q9NP99 234 aa5.29□□□□□ -1.56
PDLIM5-215ENST00000511586 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 A0A1B0GV50 99 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 COX7A2P2O60397 106 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 MBP02144 154 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 ID1P41134 155 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 FHITP49789 147 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 B2MP61769 119 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PRR20EP86478 221 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PRR20CP86479 221 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PRR20DP86480 221 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PRR20BP86481 221 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PRR20AP86496 221 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PSMG4Q5JS54 123 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 FFAR4Q5NUL3 377 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 MIC13Q5XKP0 118 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PATE2Q6UY27 113 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 Q6ZWC4 215 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 LINC00305Q7Z4B0 112 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 STHQ8IWL8 128 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 OR1L4Q8NGR5 311 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 WWC2-AS2Q96NR7 200 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 UHRF2Q96PU4 802 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PFDN5Q99471 154 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 NPCDR1Q9BY65 106 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 CSTL1Q9H114 145 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 SLC39A9Q9NUM3 307 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 PLA2G2EQ9NZK7 142 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 RFNGQ9Y644 331 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 TGP01266 2768 aa5.28□□□□□ -1.56
PDLIM5-215ENST00000511586 MAP1LC3B2A6NCE7 125 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 KNCNA6PVL3 124 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 ISLRO14498 428 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 SOCS3O14543 225 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 PSMB3P49720 205 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 ACOT6Q3I5F7 207 aaPredicted RBP5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 ACTL10Q5JWF8 245 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 CCDC28AQ8IWP9 274 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 GATAD1Q8WUU5 269 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 SFT2D1Q8WV19 159 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 TMEM37Q8WXS4 190 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 C16orf92Q96LL3 132 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 LINC00052Q96N35 136 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 MAP1LC3BQ9GZQ8 125 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 RETNQ9HD89 108 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 PXMP4Q9Y6I8 212 aa5.27□□□□□ -1.57
PDLIM5-215ENST00000511586 SPRY2O43597 315 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 IFNA1P01562 189 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 PEA15Q15121 130 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 GUK1Q16774 197 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 FAM122CQ6P4D5 195 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 MORN3Q6PF18 240 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 TRPT1Q86TN4 253 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 BPIFA4PQ86YQ2 179 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 IQCF2Q8IXL9 164 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 LYPD6BQ8NI32 183 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 OVOL2Q9BRP0 275 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 ACTR3CQ9C0K3 210 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 EIF5A2Q9GZV4 153 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 RPRMQ9NS64 109 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 TP53TG1Q9Y2A0 90 aa5.26□□□□□ -1.57
PDLIM5-215ENST00000511586 A0A087X0K7 114 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 TRAV1-1A0A0B4J248 108 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 CTXND1A0A1B0GTU2 59 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 H3BMM0 161 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 MRPS12O15235 138 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 CA1P00915 261 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 APOC3P02656 99 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 SFTA3P0C7M3 94 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 HLA-DRB4P13762 266 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 M6PRP20645 277 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 CDC34P49427 236 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 PPT1P50897 306 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 NUTF2P61970 127 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 DEFB135Q30KP9 77 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 SPATA31B1PQ5VZV4 182 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 EBLN2Q6P2I7 272 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 LCN15Q6UWW0 184 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 FOXI2Q6ZQN5 318 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms