RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
HMGB2-205ENST00000511316 HOXA4Q00056 320 aaPredicted RBP10.23□□□□□ -0.77
HMGB2-205ENST00000511316 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
HMGB2-205ENST00000511316 OR2T6Q8NHC8 308 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 C8orf46Q8TAG6 207 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 DPF1Q92782 380 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 CCL13Q99616 98 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
HMGB2-205ENST00000511316 HIVEP2P31629 2446 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 K7EQM0 130 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 HAX1O00165 279 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 CHEK1O14757 476 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 FSTL3O95633 263 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 EBLN2Q6P2I7 272 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 MOB3BQ86TA1 216 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 OR4F17Q8NGA8 305 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 MALRD1Q5VYJ5 2156 aa10.23□□□□□ -0.77
HMGB2-205ENST00000511316 PGPA6NDG6 321 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 PYYP10082 97 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 MYOD1P15172 320 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 IGLL1P15814 213 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 TFPI2P48307 235 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 CAMPP49913 170 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 PATE2Q6UY27 113 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 LYPD1Q8N2G4 141 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 OR10W1Q8NGF6 305 aa10.22□□□□□ -0.77
HMGB2-205ENST00000511316 IGKV1D-37A0A075B6S9 117 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.21□□□□□ -0.77
HMGB2-205ENST00000511316 TRAV5A0A0B4J249 113 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 NDUFB3O43676 98 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.77
HMGB2-205ENST00000511316 TCRAP04437 139 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 HINT1P49773 126 aaPredicted RBP10.21□□□□□ -0.77
HMGB2-205ENST00000511316 WT1-ASQ06250 92 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 RIGQ13278 110 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 FBLN7Q53RD9 439 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 PRR27Q6MZM9 219 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 FAM216BQ8N7L0 139 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 OR4C5Q8NGB2 326 aa10.21□□□□□ -0.77
HMGB2-205ENST00000511316 NAV3Q8IVL0 2385 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 LOC102724200A0A096LPH7 203 aaPredicted RBP10.21□□□□□ -0.78
HMGB2-205ENST00000511316 FBLL1A6NHQ2 334 aaKnown RBP10.21□□□□□ -0.78
HMGB2-205ENST00000511316 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 CDKN1BP46527 198 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 LMO4P61968 165 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 RNF5Q99942 180 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 PIMREGQ9BSJ6 248 aa10.21□□□□□ -0.78
HMGB2-205ENST00000511316 FNDC4Q9H6D8 234 aaPredicted RBP10.21□□□□□ -0.78
HMGB2-205ENST00000511316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.2□□□□□ -0.781e-12■■■■□ 26.4
HMGB2-205ENST00000511316 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
HMGB2-205ENST00000511316 CSN1S1P47710 185 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 PCP4P48539 62 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 RHOGP84095 191 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 HIST1H1AQ02539 215 aaPredicted RBP10.2□□□□□ -0.78
HMGB2-205ENST00000511316 GDF5OSQ5U4N7 250 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 KAAG1Q9UBP8 84 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 DYSFO75923 2080 aa10.2□□□□□ -0.78
HMGB2-205ENST00000511316 C2CD3Q4AC94 2353 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 PPIAL4EA0A075B759 164 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 IGHV1-24A0A0C4DH33 117 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 PPIAL4DF5H284 164 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 CCL25O15444 150 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 MOSP00540 346 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 PPIAL4FP0DN26 164 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 GP9P14770 177 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 RPL27AP46776 148 aaKnown RBP10.19□□□□□ -0.78
HMGB2-205ENST00000511316 MORN5Q5VZ52 161 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 CCL17Q92583 94 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 LINC00479Q96M42 142 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 Q9H3A6 140 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 PPIAL4AQ9Y536 164 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 TRAV34A0A0B4J273 112 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 CD5LO43866 347 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 C16orf54Q6UWD8 224 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 Q86TA4 180 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 DEFB125Q8N687 156 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 TMEM75Q8N9X5 138 aa10.19□□□□□ -0.78
HMGB2-205ENST00000511316 A0A1B0GUT8 65 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 ORM2P19652 201 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 S100A7P31151 101 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 SEC11AP67812 179 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 MLANAQ16655 118 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 FAM120AOSQ5T036 256 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 TMEM200BQ69YZ2 307 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 H1FXQ92522 213 aaKnown RBP10.18□□□□□ -0.78
HMGB2-205ENST00000511316 JMJD1CQ15652 2540 aa10.18□□□□□ -0.78
HMGB2-205ENST00000511316 A0A1W2PPI3 338 aa10.17□□□□□ -0.78
HMGB2-205ENST00000511316 RBP4P02753 201 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms