RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 IGHV3-21A0A0B4J1V1 117 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 A0A1W2PP11 408 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 LINC00473A8K010 186 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 ZNF701M0R085 212 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 SCGB1D1O95968 90 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 PPP1R17O96001 155 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 IGKV1-16P04430 117 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 NANOS2P60321 138 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 EFNB1P98172 346 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 KIAA0141Q14154 515 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 BAK1Q16611 211 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 PRSS54Q6PEW0 395 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TCEAL7Q9BRU2 100 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 C1orf43Q9BWL3 253 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 ACTR3CQ9C0K3 210 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 ALX4Q9H161 411 aaPredicted RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 YTHDF2Q9Y5A9 579 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TNCP24821 2201 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 RANBP2P49792 3224 aaKnown RBP2.12□□□□□ -2.07
CLOCK-209ENST00000511124 TENM4Q6N022 2769 aa2.12□□□□□ -2.07
CLOCK-209ENST00000511124 A0A0D9SG52 128 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 RBFOX3A6NFN3 312 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 A8MWV9 139 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 E5RGE8 158 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM262E9PQX1 116 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 PRH1P02810 166 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 AREGP15514 252 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 JUNBP17275 347 aaPredicted RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FABP5Q01469 135 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 SLC38A11Q08AI6 406 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 NMSQ5H8A3 153 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FAM222AQ5U5X8 452 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 SUN5Q8TC36 379 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TMED6Q8WW62 240 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 ASB13Q8WXK3 278 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM101Q96IK0 257 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 HDHD3Q9BSH5 251 aaPredicted RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 SLIRPQ9GZT3 109 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 NAGKQ9UJ70 344 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 NSG2Q9Y328 171 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 ARHGAP32A7KAX9 2087 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV3OR16-13A0A075B7E8 117 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 C7orf71A4D174 169 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 KNCNA6PVL3 124 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 CTDSPLO15194 276 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 APOMO95445 188 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TRGC1P0CF51 173 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 PAX6P26367 422 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 CNN1P51911 297 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM88Q6PEY1 159 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TRPT1Q86TN4 253 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 RAB24Q969Q5 203 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 SMIM8Q96KF7 97 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 KRTAP4-7Q9BYR0 210 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FGF23Q9GZV9 251 aaPredicted RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 SAV1Q9H4B6 383 aaPredicted RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 LSM5Q9Y4Y9 91 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FRAS1Q86XX4 4008 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 IGLC7A0M8Q6 106 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 F5H697 171 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 J3QRE1 110 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 AGPAT2O15120 278 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 CRYGBP07316 175 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 ASIPP42127 132 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 PAX9P55771 341 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 DIAPH2-AS1Q14236 149 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 KIR3DS1Q14943 382 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 C10orf55Q5SWW7 151 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 Q8N1Y9 231 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 TAF15Q92804 592 aaKnown RBP eCLIP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 AGMATQ9BSE5 352 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FKBP14Q9NWM8 211 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 PRR13Q9NZ81 148 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 MSRB1Q9NZV6 116 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 LINC00474Q9P2X8 69 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 FUT9Q9Y231 359 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 MRPS16Q9Y3D3 137 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
CLOCK-209ENST00000511124 DSPP15924 2871 aaKnown RBP2.11□□□□□ -2.07
CLOCK-209ENST00000511124 NBDYA0A0U1RRE5 68 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 SFT2D2O95562 160 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 GYPEP15421 78 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 AZU1P20160 251 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 FGF7P21781 194 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 SULT1A2P50226 295 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 ZNF134P52741 427 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 TMEM50BP56557 158 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 LSM3P62310 102 aaKnown RBP2.1□□□□□ -2.07
CLOCK-209ENST00000511124 UBE2L3P68036 154 aaKnown RBP2.1□□□□□ -2.07
CLOCK-209ENST00000511124 ZNF90Q03938 601 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 ZNF674Q2M3X9 581 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 C10orf99Q6UWK7 81 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 APRG1Q8IVJ8 170 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 OR11H4Q8NGC9 324 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 S4R3C0 116 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 WDR87Q6ZQQ6 2873 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 NOTCH1P46531 2555 aa2.1□□□□□ -2.07
CLOCK-209ENST00000511124 IGHV1OR15-1A0A075B7D0 117 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms