RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CDS2O95674 445 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 MOSP00540 346 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 CTSDP07339 412 aaPredicted RBP3.71□□□□□ -1.82
NEK1-204ENST00000509912 HTR2CP28335 458 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 RPL36AP83881 106 aaKnown RBP3.71□□□□□ -1.82
NEK1-204ENST00000509912 ACOT7LQ6ZUV0 252 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 SLC25A42Q86VD7 318 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 PDPNQ86YL7 162 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 FAM24BQ8N5W8 94 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 SLC35G3Q8N808 338 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 ZNF738Q8NE65 137 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 RNASEH2CQ8TDP1 164 aaKnown RBP3.71□□□□□ -1.82
NEK1-204ENST00000509912 ATG5Q9H1Y0 275 aa3.71□□□□□ -1.82
NEK1-204ENST00000509912 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.71□□□□□ -1.82
NEK1-204ENST00000509912 TMEM14DPA8MWL7 114 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 GABARAPH6UMI1 98 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 CHST1O43916 411 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 OR5G3P0C626 314 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 C8orf88P0DMB2 117 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 GABRA2P47869 451 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 DLX1P56177 255 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 UBE2MP61081 183 aaKnown RBP3.7□□□□□ -1.82
NEK1-204ENST00000509912 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 C1orf194Q5T5A4 169 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 ABHD12Q8N2K0 398 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 SEC11CQ9BY50 192 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 SLC2A8Q9NY64 477 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 OR2H2O95918 312 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 PLP1P60201 277 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 RPS20P60866 119 aaKnown RBP3.7□□□□□ -1.82
NEK1-204ENST00000509912 TCTEX1D4Q5JR98 221 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 H2BFWTQ7Z2G1 175 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 GPR146Q96CH1 333 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 FLYWCH2Q96CP2 140 aaKnown RBP3.7□□□□□ -1.82
NEK1-204ENST00000509912 SEH1LQ96EE3 360 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 CALYQ9NYX4 217 aa3.7□□□□□ -1.82
NEK1-204ENST00000509912 TRAV39A0A0B4J263 110 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 FAM223BA6NKX1 122 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 MCRIP1C9JLW8 97 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 K7EIL1 84 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HSD17B6O14756 317 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 DEGS1O15121 323 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 CD74P04233 296 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 NFYAP23511 347 aaPredicted RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 GPM6AP51674 278 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 KISS1Q15726 138 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 LTC4SQ16873 150 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 SPATA31B1PQ5VZV4 182 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 GSG1LQ6UXU4 331 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 FAM223AQ8IWN6 122 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 OR4A4PQ8NGN8 299 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 SIGMAR1Q99720 223 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 TUBA4BQ9H853 241 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 RPS10P5Q9NQ39 176 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 C7orf66A4D0T2 115 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BKO60814 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BJP06899 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 IGLL1P15814 213 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 FUT3P21217 361 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BOP23527 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 COX7A1P24310 79 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BBP33778 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 ZNF93P35789 620 aaPredicted RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BDP58876 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BCP62807 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 EIF4EBP1Q13541 118 aaPredicted RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST2H2BEQ16778 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 PRSS54Q6PEW0 395 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 Q8N9W7 124 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 OR1S2Q8NGQ3 325 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BHQ93079 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 MRAP2Q96G30 205 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BNQ99877 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HIST1H2BMQ99879 126 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 ARL6Q9H0F7 186 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 OR51J1Q9H342 316 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 RETNQ9HD89 108 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 TFF1P04155 84 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 HSPB1P04792 205 aaKnown RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 VDAC1P21796 283 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 ZBTB25P24278 435 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 PRSS3P35030 304 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 RPS10P46783 165 aaKnown RBP3.69□□□□□ -1.82
NEK1-204ENST00000509912 OR3A4PP47883 348 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 SRPXP78539 464 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 UNC119Q13432 240 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 UNQ5815/PRO19632Q6UWF5 114 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 MTURNQ8N3F0 131 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 OR56B4Q8NH76 319 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 S100A13Q99584 98 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 TM2D3Q9BRN9 247 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 BANF2Q9H503 90 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 UQCC1Q9NVA1 299 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 VSIG4Q9Y279 399 aa3.69□□□□□ -1.82
NEK1-204ENST00000509912 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms