RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FAT2Q9NYQ8 4349 aa10.9□□□□□ -0.67
TPM3-219ENST00000509409 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
TPM3-219ENST00000509409 CXCL3P19876 107 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 TAS2R30P59541 319 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 SLC38A11Q08AI6 406 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 PATE2Q6UY27 113 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 ARV1Q9H2C2 271 aa10.89□□□□□ -0.67
TPM3-219ENST00000509409 A0A087X0K7 114 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 F5H768 121 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 L7N2F9 121 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 TSC22D2O75157 780 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 SNRPCP09234 159 aaKnown RBP10.88□□□□□ -0.67
TPM3-219ENST00000509409 AZU1P20160 251 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 VAMP2P63027 116 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 FCN2Q15485 313 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 SOHLH1Q5JUK2 328 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 C15orf53Q8NAA6 179 aa10.88□□□□□ -0.67
TPM3-219ENST00000509409 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
TPM3-219ENST00000509409 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 FAM25EA8MYX2 175 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 TSPOP30536 169 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 BCAP31P51572 246 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 CNPY1Q3B7I2 92 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 PXDC1Q5TGL8 231 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 LINC00305Q7Z4B0 112 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 ZNF546Q86UE3 836 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 MITD1Q8WV92 249 aa10.87□□□□□ -0.67
TPM3-219ENST00000509409 SDHCQ99643 169 aaPredicted RBP10.87□□□□□ -0.67
TPM3-219ENST00000509409 RCL1Q9Y2P8 373 aaKnown RBP10.87□□□□□ -0.67
TPM3-219ENST00000509409 AGPAT2O15120 278 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 NUDT3O95989 172 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
TPM3-219ENST00000509409 BTCP35070 178 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 TAS2R60P59551 318 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 ARL16Q0P5N6 197 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 TMEM256Q8N2U0 113 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 GGACTQ9BVM4 153 aa10.86□□□□□ -0.67
TPM3-219ENST00000509409 C7orf66A4D0T2 115 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 K7EPK0 472 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 CCSO14618 274 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 IL7P13232 177 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 C1orf134Q5TEV5 83 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 Q6ZR54 194 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 BPIFA4PQ86YQ2 179 aa10.85□□□□□ -0.67
TPM3-219ENST00000509409 LSM5Q9Y4Y9 91 aaKnown RBP10.85□□□□□ -0.67
TPM3-219ENST00000509409 KIAA1109Q2LD37 5005 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 C5orf51A6NDU8 294 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 CBY3A6NI87 242 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 H3BTX0 84 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 ATP5G1P05496 136 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 CXCL2P19875 107 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 CDKN1BP46527 198 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 ATP5G3P48201 142 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 RAB31Q13636 194 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 C10orf113Q5VZT2 155 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 OR10J6PQ8NGY7 276 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 C16orf74Q96GX8 76 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 C20orf85Q9H1P6 137 aa10.84□□□□□ -0.67
TPM3-219ENST00000509409 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
TPM3-219ENST00000509409 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
TPM3-219ENST00000509409 MRPS12O15235 138 aaKnown RBP10.83□□□□□ -0.68
TPM3-219ENST00000509409 MED14OSP0DP75 135 aa10.83□□□□□ -0.68
TPM3-219ENST00000509409 CAV2P51636 162 aa10.83□□□□□ -0.68
TPM3-219ENST00000509409 FAM3BP58499 235 aaPredicted RBP10.83□□□□□ -0.68
TPM3-219ENST00000509409 Q6ZRG5 221 aa10.83□□□□□ -0.68
TPM3-219ENST00000509409 MGST2Q99735 147 aa10.83□□□□□ -0.68
TPM3-219ENST00000509409 DNAJC4Q9NNZ3 241 aa10.83□□□□□ -0.68
TPM3-219ENST00000509409 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
TPM3-219ENST00000509409 TRAV6A0A075B6T7 132 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 LYRM1O43325 122 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 CAMLGP49069 296 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 ZNF493Q6ZR52 646 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 CCDC28AQ8IWP9 274 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 TMEM37Q8WXS4 190 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 PKHD1P08F94 4074 aa10.82□□□□□ -0.68
TPM3-219ENST00000509409 FAM24AA6NFZ4 105 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 H7BYZ3 331 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 PLA2G10O15496 165 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 CST7O76096 145 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 TCRBP04435 133 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 PVALBP20472 110 aaPredicted RBP10.81□□□□□ -0.68
TPM3-219ENST00000509409 CCL18P55774 89 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 CLINT1Q14677 625 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 OPCMLQ14982 345 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 NRARPQ7Z6K4 114 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 OR1L4Q8NGR5 311 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 PARD6GQ9BYG4 376 aaPredicted RBP10.81□□□□□ -0.68
TPM3-219ENST00000509409 PXMP4Q9Y6I8 212 aa10.81□□□□□ -0.68
TPM3-219ENST00000509409 DYNC1H1Q14204 4646 aaKnown RBP10.8□□□□□ -0.68
TPM3-219ENST00000509409 TRAV5A0A0B4J249 113 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 J3KRW8 73 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms