RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NEU1Q99519 415 aa10.62□□□□□ -0.71
UBE2D3-228ENST00000508974 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
UBE2D3-228ENST00000508974 GGACTQ9BVM4 153 aa10.62□□□□□ -0.71
UBE2D3-228ENST00000508974 RFNGQ9Y644 331 aa10.62□□□□□ -0.71
UBE2D3-228ENST00000508974 UBE2L5PA0A1B0GUS4 154 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 IGSF23A1L1A6 192 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 SIX6O95475 246 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 HBE1P02100 147 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 CAMLGP49069 296 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 MIC13Q5XKP0 118 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 LINC00299Q6ZSB3 139 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 NRARPQ7Z6K4 114 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
UBE2D3-228ENST00000508974 TRAV12-2A0A075B6T6 113 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 A0A087X0K7 114 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 SMIM9A6NGZ8 99 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 A6NHS1 94 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 UPK1BO75841 260 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 DUSP14O95147 198 aaKnown RBP10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 PRM2P04554 102 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 CXCL3P19876 107 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 RHOBP62745 196 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 BAXQ07812 192 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 FAM222AQ5U5X8 452 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 C10orf113Q5VZT2 155 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 BAP18Q8IXM2 172 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 TMEM37Q8WXS4 190 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 LYRM2Q9NU23 88 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 UQCC1Q9NVA1 299 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
UBE2D3-228ENST00000508974 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 A8MTW9 85 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 MRPS12O15235 138 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 HTN3P15516 51 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 SULT1A1P50225 295 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 TCTAP57738 103 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 IFITM3Q01628 133 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 RAB31Q13636 194 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 OPCMLQ14982 345 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 PSG3Q16557 428 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 TMEM252Q8N6L7 170 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 GPN1Q9HCN4 374 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 PPP1R14DQ9NXH3 145 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 PTTG2Q9NZH5 202 aa10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 YTHDF2Q9Y5A9 579 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-228ENST00000508974 BIRC6Q9NR09 4857 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 SLC17A3O00476 420 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 INSP01308 110 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 IL15RAQ13261 267 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 LRRC37A5PQ49AS3 106 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 STX12Q86Y82 276 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 OR8A1Q8NGG7 326 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 DKK2Q9UBU2 259 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 WDR83OSQ9Y284 106 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 VPS13DQ5THJ4 4388 aa10.58□□□□□ -0.72
UBE2D3-228ENST00000508974 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 CRXO43186 299 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 FGF7P21781 194 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 LCN15Q6UWW0 184 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 Q6ZRG5 221 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
UBE2D3-228ENST00000508974 AMBPP02760 352 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 HTN1P15515 57 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 S100A11P31949 105 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 HBG1P69891 147 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 HBG2P69892 147 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 VWC2Q2TAL6 325 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 PARD6GQ9BYG4 376 aaPredicted RBP10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 DNAJC4Q9NNZ3 241 aa10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 ZNF331Q9NQX6 463 aaPredicted RBP10.56□□□□□ -0.72
UBE2D3-228ENST00000508974 PRAC2D3DTV9 90 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 INMT-MINDY4F8WBC2 141 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 H3BQ15 152 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 B2MP61769 119 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 NHLH2Q02577 135 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 OR1L4Q8NGR5 311 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 THAP6Q8TBB0 222 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 SLC50A1Q9BRV3 221 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 NDUFAF3Q9BU61 184 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 SLC39A9Q9NUM3 307 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 OR5AC2Q9NZP5 309 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
UBE2D3-228ENST00000508974 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 IGLC2P0DOY2 106 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 CXCL2P19875 107 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 AZU1P20160 251 aa10.54□□□□□ -0.72
UBE2D3-228ENST00000508974 DAD1P61803 113 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms