RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FGF7P21781 194 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 CBLN1P23435 193 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 CMC4P56277 68 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 SERF2P84101 59 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF90Q03938 601 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 CLINT1Q14677 625 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 OPCMLQ14982 345 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 LAMTOR1Q6IAA8 161 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 UNQ9165/PRO28630Q6UXU0 137 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 IL34Q6ZMJ4 242 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 KCNRGQ8N5I3 272 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR1L4Q8NGR5 311 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 DYNLRB2Q8TF09 96 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 GATAD1Q8WUU5 269 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 GPR82Q96P67 336 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 RNF2Q99496 336 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 MGST2Q99735 147 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 PSMG3Q9BT73 122 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 C20orf24Q9BUV8 137 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 NPCDR1Q9BY65 106 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 VSIRQ9H7M9 311 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 FBXL17Q9UF56 701 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 SMPXQ9UHP9 88 aa4.14□□□□□ -1.75
HMGB1P44-201ENST00000508597 TRAV2A0A0B4J234 112 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGHV3-35A0A0C4DH35 117 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 A0A1B0GVG6 124 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 HELTA6NFD8 242 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 CHEK1O14757 476 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 BUB3O43684 328 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGLV1-51P01701 117 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 MBP02144 154 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 LINC00869P0C866 280 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 MEOX2P50222 304 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 LYZP61626 148 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 B2MP61769 119 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 PAFAH1B2P68402 229 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 DEFB114Q30KQ6 69 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZFP69Q49AA0 526 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 SAMD13Q5VXD3 122 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 LCN12Q6JVE5 192 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR11H4Q8NGC9 324 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF414Q96IQ9 312 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 RHPN1-AS1Q9BWJ2 59 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 GGTLC1Q9BX51 225 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 DNAJC4Q9NNZ3 241 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 SLC39A9Q9NUM3 307 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 HIGD1AQ9Y241 93 aa4.13□□□□□ -1.75
HMGB1P44-201ENST00000508597 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGHV4-28A0A0C4DH34 117 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 SMLR1H3BR10 107 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 VCYO14598 125 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 BCL2L11O43521 198 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 COX7A2P2O60397 106 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 PFDN1O60925 122 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGLL1P15814 213 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 RPL7P18124 248 aaKnown RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 ORM2P19652 201 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 CAMPP49913 170 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 EGFEM1PQ0D2K5 195 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 USF2Q15853 346 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 ACOT6Q3I5F7 207 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 KPRPQ5T749 579 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 C10orf113Q5VZT2 155 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 EIF5AL1Q6IS14 154 aaKnown RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 RBPMS2Q6ZRY4 209 aaKnown RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR1B1Q8NGR6 318 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR2G3Q8NGZ4 309 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 STOML3Q8TAV4 291 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 SPAG8Q99932 426 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 SHANK2-AS3Q9BTD1 123 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 PBDC1Q9BVG4 233 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 MRPL32Q9BYC8 188 aaKnown RBP4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 SMIM3Q9BZL3 60 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 ARL6Q9H0F7 186 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 WFDC1Q9HC57 220 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 PXMP4Q9Y6I8 212 aa4.12□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF98A6NK75 572 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 UMAD1C9J7I0 102 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 H3BRN7 92 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF207O43670 478 aaKnown RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR5G3P0C626 314 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 TPT1P13693 172 aaKnown RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 CXCL2P19875 107 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 M6PRP20645 277 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 GATA2P23769 480 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 GALR1P47211 349 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 AMTP48728 403 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 TAS2R45P59539 299 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 RHOBP62745 196 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 LGALSLQ3ZCW2 172 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 MIC13Q5XKP0 118 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 RPL7L1Q6DKI1 246 aaKnown RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 ADAMTSL5Q6ZMM2 481 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM182Q6ZP80 229 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 LINC00305Q7Z4B0 112 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 SLC51BQ86UW2 128 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms