RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 BAP18Q8IXM2 172 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 RNF182Q8N6D2 247 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 GNPNAT1Q96EK6 184 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 C20orf173Q96LM9 149 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 LINC00052Q96N35 136 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 PFDN5Q99471 154 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 PSMG3Q9BT73 122 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 GPR61Q9BZJ8 451 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 FUT9Q9Y231 359 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 TRAV8-2A0A0B4J237 113 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 HELTA6NFD8 242 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 K7EQG2 157 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 BMI1P35226 326 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 GALR1P47211 349 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 FGF8P55075 233 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 DEFB131AP59861 70 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 ODF3L2Q3SX64 289 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 C1orf194Q5T5A4 169 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 DCANP1Q8TF63 244 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 RAB24Q969Q5 203 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 NRN1Q9NPD7 142 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 KCNIP2Q9NS61 270 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 ZNF586Q9NXT0 402 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 PFDN2Q9UHV9 154 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 A0A1W2PPV4 95 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 F6UB75 175 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 OR7C2O60412 319 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 RPL7P18124 248 aaKnown RBP6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 RHOBP62745 196 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 TMEM41BQ5BJD5 291 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 PSMG4Q5JS54 123 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 AKR1C8PQ5T2L2 129 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 LCN15Q6UWW0 184 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 OR2K2Q8NGT1 345 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 TMPRSS5Q9H3S3 457 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 MAP6D1Q9H9H5 199 aa6.57□□□□□ -1.36
SCAMP1-202ENST00000506858 TGP01266 2768 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 OR4C46A6NHA9 309 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 ZNF705FA8MVS1 300 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 SOCS3O14543 225 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 ZNF705DP0CH99 300 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 ZNF705BP0CI00 300 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 IGLC2P0DOY2 106 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 CDC34P49427 236 aaPredicted RBP6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 PAFAH1B2P68402 229 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 SERF2P84101 59 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 ALKAL2Q6UX46 152 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 BPIFA4PQ86YQ2 179 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 IQCF2Q8IXL9 164 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 STOML3Q8TAV4 291 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 FAM213BQ8TBF2 198 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 RNF141Q8WVD5 230 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 FXYD5Q96DB9 178 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 C16orf92Q96LL3 132 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 PAXXQ9BUH6 204 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 OR51M1Q9H341 326 aa6.56□□□□□ -1.36
SCAMP1-202ENST00000506858 NDUFB4O95168 129 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 SEC11BP0C7V7 166 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 ARL14EPLP0DKL9 152 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 GDF5OSQ5U4N7 250 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 GTSCR1Q86UQ5 136 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 EXOC3-AS1Q8N2X6 119 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 LRRC20Q8TCA0 184 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 MRAPQ8TCY5 172 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 PCNPQ8WW12 178 aaKnown RBP6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 PHYHIPLQ96FC7 376 aa6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 MRPL32Q9BYC8 188 aaKnown RBP6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 ACTR3CQ9C0K3 210 aaPredicted RBP6.55□□□□□ -1.36
SCAMP1-202ENST00000506858 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 RBMY1BA6NDE4 496 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 RBMY1EA6NEQ0 496 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 PRAC2D3DTV9 90 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 M0R3E3 92 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 IGKV3-20P01619 116 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 NBEAP1P0C6P0 100 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 RBMY1DP0C7P1 496 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 IGHV4-30-4P0DP06 118 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 HIST1H1EP10412 219 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 RPL35AP18077 110 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 RANP62826 216 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 UBE2L3P68036 154 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 SAT2Q96F10 170 aaPredicted RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 ASCL2Q99929 193 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 HRH4Q9H3N8 390 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 TRBV19A0A075B6N1 114 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 MBP02144 154 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 STAG3L2P0CL84 134 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms