RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 FAM24BQ8N5W8 94 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.59□□□□□ -2.31
GYPB-207ENST00000506679 OR5D14Q8NGL3 314 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 PATE1Q8WXA2 126 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 BORCS5Q969J3 196 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 MUCL1Q96DR8 90 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 HOPXQ9BPY8 73 aaPredicted RBP0.59□□□□□ -2.31
GYPB-207ENST00000506679 MAP1LC3BQ9GZQ8 125 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 CACYBPQ9HB71 228 aaKnown RBP0.59□□□□□ -2.31
GYPB-207ENST00000506679 CDC42SE1Q9NRR8 79 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 ORMDL1Q9P0S3 153 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 SS18L2Q9UHA2 77 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 ATPIF1Q9UII2 106 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 OR52A1Q9UKL2 312 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 ZFP30Q9Y2G7 519 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 LAMB4A4D0S4 1761 aa0.59□□□□□ -2.32
GYPB-207ENST00000506679 RYR1P21817 5038 aa0.59□□□□□ -2.32
GYPB-207ENST00000506679 POLEQ07864 2286 aa0.59□□□□□ -2.32
GYPB-207ENST00000506679 MCM3APO60318 1980 aa0.59□□□□□ -2.32
GYPB-207ENST00000506679 NISCHQ9Y2I1 1504 aa0.59□□□□□ -2.32
GYPB-207ENST00000506679 RYR2Q92736 4967 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 N4BP2Q86UW6 1770 aaPredicted RBP0.58□□□□□ -2.32
GYPB-207ENST00000506679 TRAV27A0A087WT01 109 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 IGLV3-32A0A0A0MS00 114 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 TRBV6-4A0A1B0GX49 114 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 H3BQV1 296 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 M0R233 179 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 LYRM1O43325 122 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 NUPR1O60356 82 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 CST7O76096 145 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 G0S2P27469 103 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 INSL3P51460 131 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 CRYBA4P53673 196 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 TMBIM6P55061 237 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 KLRD1Q13241 179 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 RTL8BQ17RB0 113 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 PATE2Q6UY27 113 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 ZNF833PQ6ZTB9 187 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 PHF5AQ7RTV0 110 aaKnown RBP0.58□□□□□ -2.32
GYPB-207ENST00000506679 TEN1Q86WV5 123 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 OR4K15Q8NH41 348 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 ISOC1Q96CN7 298 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 HYLS1Q96M11 299 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 OBSCN-AS1Q96MR7 158 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 MCEEQ96PE7 176 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 OR2H1Q9GZK4 316 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 PCBD2Q9H0N5 130 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 TMEM14CQ9P0S9 112 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 NUBP2Q9Y5Y2 271 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 SIP14410 1827 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
GYPB-207ENST00000506679 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 PEAK1Q9H792 1746 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 PTPRFP10586 1907 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 ALPK3Q96L96 1907 aa0.58□□□□□ -2.32
GYPB-207ENST00000506679 CACNA1BQ00975 2339 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 IGHV1-58A0A0C4DH39 117 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 MAP1LC3B2A6NCE7 125 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 OR2T8A6NH00 312 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 RER1O15258 196 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 CSN2P05814 226 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 CXCL8P10145 99 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 COX7CP15954 63 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 RPL35P42766 123 aaKnown RBP0.57□□□□□ -2.32
GYPB-207ENST00000506679 ARPP19P56211 112 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 HBBP68871 147 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 PRB3Q04118 309 aaPredicted RBP0.57□□□□□ -2.32
GYPB-207ENST00000506679 TMEM78Q5T7P6 136 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 FKBP1CQ5VVH2 108 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 KRTAP26-1Q6PEX3 210 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 DCUN1D2Q6PH85 259 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 LINC00322Q6ZN03 302 aaPredicted RBP0.57□□□□□ -2.32
GYPB-207ENST00000506679 ARPINQ7Z6K5 226 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 PRR15Q8IV56 129 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 OR5AS1Q8N127 324 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 OR10AG1Q8NH19 301 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 DYDC1Q8WWB3 177 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 POP5Q969H6 163 aaKnown RBP0.57□□□□□ -2.32
GYPB-207ENST00000506679 RAB37Q96AX2 223 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 CHCHD1Q96BP2 118 aaKnown RBP0.57□□□□□ -2.32
GYPB-207ENST00000506679 LINC00052Q96N35 136 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 MED11Q9P086 117 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 HSPB8Q9UJY1 196 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 LAMTOR2Q9Y2Q5 125 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 VWFP04275 2813 aa0.57□□□□□ -2.32
GYPB-207ENST00000506679 HYDINQ4G0P3 5121 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 ANKRD31Q8N7Z5 1873 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 NUP210Q8TEM1 1887 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 KMT2CQ8NEZ4 4911 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 CASP8AP2Q9UKL3 1982 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 CHD3Q12873 2000 aaKnown RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.56□□□□□ -2.32
GYPB-207ENST00000506679 A0A1B0GV72 72 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 hDV103S1A0JD37 113 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 E7EQ34 232 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 F8W1H4 67 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 H3BRM9 83 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 CCL25O15444 150 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 FAM107AO95990 144 aa0.56□□□□□ -2.32
GYPB-207ENST00000506679 IGLV1-51P01701 117 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms