RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
UBE3D-206ENST00000505226 PAX2Q02962 417 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 S4R3C0 116 aa9.38□□□□□ -0.91
UBE3D-206ENST00000505226 RBPJQ06330 500 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 SAPCD1Q5SSQ6 148 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 GATD1Q8NB37 220 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
UBE3D-206ENST00000505226 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 PSG8Q9UQ74 426 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 INSIG2Q9Y5U4 225 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 SELENOKQ9Y6D0 94 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 K7EIM0 57 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
UBE3D-206ENST00000505226 CD5LO43866 347 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 KAAG1Q9UBP8 84 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 APC2O95996 2303 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 LYNX1G3V0Z9 82 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 LYNX1P0DP58 116 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 COTL1Q14019 142 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 OCIAD2Q56VL3 154 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 TMEM75Q8N9X5 138 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 SHANK2-AS3Q9BTD1 123 aa9.37□□□□□ -0.91
UBE3D-206ENST00000505226 TRBV6-1A0A0K0K1D8 114 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 BUB1B-PAK6H3BSN5 160 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 PSG3Q16557 428 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 PRSS3P2Q8NHM4 247 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF292O60281 2723 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 A0A1W2PRD5 423 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 A0A1W2PRF3 423 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 A0A1W2PRM7 423 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 D6R8Y8 96 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 RIGQ13278 110 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF491Q8N8L2 437 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 SIGLEC8Q9NYZ4 499 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 SH3BGRL2Q9UJC5 107 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 H3BRN7 92 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
UBE3D-206ENST00000505226 COX7A1P24310 79 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF414Q96IQ9 312 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 E7EQL1 145 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 PPBPP02775 128 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 LYZL1Q6UWQ5 148 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 ASCL5Q7RTU5 278 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 OR10AG1Q8NH19 301 aa9.35□□□□□ -0.91
UBE3D-206ENST00000505226 ARHGAP32A7KAX9 2087 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 C7orf71A4D174 169 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 UQCRFS1P47985 274 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF575Q86XF7 245 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 PAX8Q06710 450 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 ZNF493Q6ZR52 646 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 IL4P05112 153 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 APOBEC3AP31941 199 aaPredicted RBP9.34□□□□□ -0.91
UBE3D-206ENST00000505226 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
UBE3D-206ENST00000505226 RPS20P60866 119 aaKnown RBP9.34□□□□□ -0.91
UBE3D-206ENST00000505226 TMEM97Q5BJF2 176 aa9.34□□□□□ -0.91
UBE3D-206ENST00000505226 NAA38Q9BRA0 125 aaKnown RBP9.34□□□□□ -0.91
UBE3D-206ENST00000505226 CSN1S1P47710 185 aa9.33□□□□□ -0.92
UBE3D-206ENST00000505226 JMJD8Q96S16 334 aa9.33□□□□□ -0.92
UBE3D-206ENST00000505226 U3KQK5 164 aa9.33□□□□□ -0.92
UBE3D-206ENST00000505226 SMKR1H3BMG3 65 aa9.33□□□□□ -0.92
UBE3D-206ENST00000505226 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
UBE3D-206ENST00000505226 RALYQ9UKM9 306 aaKnown RBP9.33□□□□□ -0.92
UBE3D-206ENST00000505226 DYNLRB1Q9NP97 96 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 ACACAQ13085 2346 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 PLGLAQ15195 96 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 SAP30O75446 220 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 CACNG7P62955 275 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
UBE3D-206ENST00000505226 PRSS57Q6UWY2 283 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 PRELID3AQ96N28 172 aa9.32□□□□□ -0.92
UBE3D-206ENST00000505226 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
UBE3D-206ENST00000505226 WI2-2373I1.2A0A1W2PRP0 233 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 TIMM23O14925 209 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 SH2D1AO60880 128 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 GAS8-AS1O95177 125 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 CNIH1O95406 144 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 WFDC3Q8IUB2 231 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 RPEQ96AT9 228 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 VPS25Q9BRG1 176 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
UBE3D-206ENST00000505226 IGKV2-40A0A087WW87 121 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms