RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
GAPDHP40-201ENST00000505218 PAXXQ9BUH6 204 aa11.53□□□□□ -0.56
GAPDHP40-201ENST00000505218 SORL1Q92673 2214 aa11.53□□□□□ -0.56
GAPDHP40-201ENST00000505218 ISLRO14498 428 aa11.52□□□□□ -0.57
GAPDHP40-201ENST00000505218 CD7P09564 240 aa11.52□□□□□ -0.57
GAPDHP40-201ENST00000505218 PDE6HQ13956 83 aa11.52□□□□□ -0.57
GAPDHP40-201ENST00000505218 GUCA2BQ16661 112 aa11.52□□□□□ -0.57
GAPDHP40-201ENST00000505218 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
GAPDHP40-201ENST00000505218 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 SLC17A3O00476 420 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 NBEAP1P0C6P0 100 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 PSMB3P49720 205 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 RPL11P62913 178 aaKnown RBP11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
GAPDHP40-201ENST00000505218 MEGF8Q7Z7M0 2845 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 DNASE2O00115 360 aaPredicted RBP11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 HMGB3O15347 200 aaKnown RBP11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 CXorf1O96002 111 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 GCHFRP30047 84 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 TFPI2P48307 235 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 FAM74A1Q5RGS3 127 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 TEX261Q6UWH6 196 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 PRR25Q96S07 402 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 MAP6D1Q9H9H5 199 aa11.5□□□□□ -0.57
GAPDHP40-201ENST00000505218 A8MZ25 164 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 OR7C2O60412 319 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 OR10J4P0C629 311 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 WFDC3Q8IUB2 231 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 LYPD6BQ8NI32 183 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 AURKAIP1Q9NWT8 199 aaPredicted RBP11.49□□□□□ -0.57
GAPDHP40-201ENST00000505218 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 CD81P60033 236 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 ZNF680Q8NEM1 530 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 CLEC5AQ9NY25 188 aa11.48□□□□□ -0.57
GAPDHP40-201ENST00000505218 H3BTX0 84 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 H2AFB1P0C5Y9 115 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 ZNF688P0C7X2 276 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 ID1P41134 155 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 LINC00322Q6ZN03 302 aaPredicted RBP11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 TMPRSS5Q9H3S3 457 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
GAPDHP40-201ENST00000505218 A8MTW9 85 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 K7EIL1 84 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 HLA-DMBP28068 263 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 FGF8P55075 233 aaPredicted RBP11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 DEFB131AP59861 70 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 SNRPD3P62318 126 aaKnown RBP11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 PSG9Q00887 426 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 PSG3Q16557 428 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 WFDC10AQ9H1F0 79 aa11.46□□□□□ -0.57
GAPDHP40-201ENST00000505218 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 IFITM2Q01629 132 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 PSMG4Q5JS54 123 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 RNF182Q8N6D2 247 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 BLNKQ8WV28 456 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 UBQLN2Q9UHD9 624 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 ARL2-SNX15V9GYD0 113 aa11.45□□□□□ -0.58
GAPDHP40-201ENST00000505218 A0A1W2PRE2 83 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 CCL20P78556 96 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 ZNF124Q15973 351 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 DEFB125Q8N687 156 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 CLUHP3Q96NS8 147 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 Q9H3A6 140 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 FBN3Q75N90 2809 aa11.44□□□□□ -0.58
GAPDHP40-201ENST00000505218 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 PRB2P02812 416 aaPredicted RBP11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 CCDC28AQ8IWP9 274 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 LRRC20Q8TCA0 184 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
GAPDHP40-201ENST00000505218 PRKDCP78527 4128 aaKnown RBP11.42□□□□□ -0.58
GAPDHP40-201ENST00000505218 A0A0J9YX75 114 aa11.42□□□□□ -0.58
GAPDHP40-201ENST00000505218 FAM74A7A6NL05 159 aa11.42□□□□□ -0.58
GAPDHP40-201ENST00000505218 GGTLC3B5MD39 225 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms