RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 LINC01619G3V211 115 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 SOCS3O14543 225 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 NBEAP1P0C6P0 100 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 TAGLN2P37802 199 aaKnown RBP7.88□□□□□ -1.15
TPM3-217ENST00000504663 PEA15Q15121 130 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 C1orf194Q5T5A4 169 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 BPIFA4PQ86YQ2 179 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 METTL26Q96S19 204 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 TREM1Q9NP99 234 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 DAZ1Q9NQZ3 744 aaKnown RBP7.88□□□□□ -1.15
TPM3-217ENST00000504663 SMPXQ9UHP9 88 aa7.88□□□□□ -1.15
TPM3-217ENST00000504663 TSSC4Q9Y5U2 329 aaPredicted RBP7.88□□□□□ -1.15
TPM3-217ENST00000504663 TRAV8-2A0A0B4J237 113 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 CHEK1O14757 476 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 RPL7P18124 248 aaKnown RBP7.87□□□□□ -1.15
TPM3-217ENST00000504663 SYNJ2BPP57105 145 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 GUCA2BQ16661 112 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 RPEL1Q2QD12 228 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 OR11H1Q8NG94 326 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 OR1N2Q8NGR9 330 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 C2CD4CQ8TF44 421 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 SEC11CQ9BY50 192 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 SLC35B3Q9H1N7 401 aa7.87□□□□□ -1.15
TPM3-217ENST00000504663 FBN1P35555 2871 aaKnown RBP7.86□□□□□ -1.15
TPM3-217ENST00000504663 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 C2orf70A6NJV1 201 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 KRBOX1C9JBD0 128 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 PDE6HQ13956 83 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 KHDC1LQ5JSQ8 128 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 DLX4Q92988 240 aaPredicted RBP7.86□□□□□ -1.15
TPM3-217ENST00000504663 OR4F4Q96R69 305 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 TXNDC17Q9BRA2 123 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 DERL1Q9BUN8 251 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 RHPN1-AS1Q9BWJ2 59 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 Q9H3A6 140 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 UFC1Q9Y3C8 167 aa7.86□□□□□ -1.15
TPM3-217ENST00000504663 A0A1B0GUS0 222 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 A0A1W2PRX2 142 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 ZNF253O75346 499 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 CSN3P07498 182 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 S100A1P23297 94 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 HLA-DMBP28068 263 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 GNG5P63218 68 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 FAM106AQ4KMX7 169 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 AWAT1Q58HT5 328 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 CST9LP1Q5W188 147 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 OR8I2Q8N0Y5 310 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 EXOC3-AS1Q8N2X6 119 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 OR4F17Q8NGA8 305 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 GPR82Q96P67 336 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 CITED1Q99966 193 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 PARLQ9H300 379 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 OTORQ9NRC9 128 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 MLXQ9UH92 298 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 ATRQ13535 2644 aa7.85□□□□□ -1.15
TPM3-217ENST00000504663 ZNF320A2RRD8 509 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 F6UZH7 168 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 M0R3E3 92 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 CCL24O00175 119 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 PDE6DO43924 150 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 RANP62826 216 aaKnown RBP7.84□□□□□ -1.15
TPM3-217ENST00000504663 ATRAIDQ6UW56 229 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 S100A7AQ86SG5 101 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 NDUFA11Q86Y39 141 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 SPATA3Q8NHX4 192 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 NARS2Q96I59 477 aaKnown RBP7.84□□□□□ -1.15
TPM3-217ENST00000504663 IGF2BP2-AS1Q96M15 143 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 ZMAT4Q9H898 229 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 ZNF331Q9NQX6 463 aaPredicted RBP7.84□□□□□ -1.15
TPM3-217ENST00000504663 SELENOKQ9Y6D0 94 aa7.84□□□□□ -1.15
TPM3-217ENST00000504663 VWFP04275 2813 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 PGPA6NDG6 321 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 F8W036 122 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 PEX7O00628 323 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 PRB4P10163 310 aaPredicted RBP7.83□□□□□ -1.16
TPM3-217ENST00000504663 CBLN1P23435 193 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 FOXL1Q12952 345 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 IGFL4Q6B9Z1 124 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 LYPD1Q8N2G4 141 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 C5orf17Q8NAS9 161 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 OR9G4Q8NGQ1 327 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 DCANP1Q8TF63 244 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 RPUSD4Q96CM3 377 aaKnown RBP7.83□□□□□ -1.16
TPM3-217ENST00000504663 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 TCEAL7Q9BRU2 100 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 RNF24Q9Y225 148 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 KLF12Q9Y4X4 402 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 DNAH3Q8TD57 4116 aa7.83□□□□□ -1.16
TPM3-217ENST00000504663 A0A1W2PS18 150 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 TCRAP04437 139 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 FOLR2P14207 255 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 S100A7P31151 101 aa7.82□□□□□ -1.16
TPM3-217ENST00000504663 GALR1P47211 349 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms