RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 STARD9Q9P2P6 4700 aa15.34■□□□□ 0.05
TRAPPC11-203ENST00000504526 RBMY1A1P0DJD3 496 aaKnown RBP15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 RBMY1CP0DJD4 496 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 CXCL3P19876 107 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 NHLH2Q02577 135 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 RBMY1FQ15415 496 aaKnown RBP15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF709Q8N972 641 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF738Q8NE65 137 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 NEU1Q99519 415 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 SLC50A1Q9BRV3 221 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 PXMP4Q9Y6I8 212 aa15.33■□□□□ 0.04
TRAPPC11-203ENST00000504526 SMIM9A6NGZ8 99 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 AMBPP02760 352 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 FXYD7P58549 80 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 NANOS2P60321 138 aaKnown RBP15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 IGFL4Q6B9Z1 124 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF705AQ6ZN79 300 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 RNF182Q8N6D2 247 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 NPCDR1Q9BY65 106 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 SLC35B3Q9H1N7 401 aa15.32■□□□□ 0.04
TRAPPC11-203ENST00000504526 MPC2O95563 127 aa15.31■□□□□ 0.04
TRAPPC11-203ENST00000504526 CNN1P51911 297 aaKnown RBP15.31■□□□□ 0.04
TRAPPC11-203ENST00000504526 PSG3Q16557 428 aa15.31■□□□□ 0.04
TRAPPC11-203ENST00000504526 MORN5Q5VZ52 161 aa15.31■□□□□ 0.04
TRAPPC11-203ENST00000504526 KCNIP2Q9NS61 270 aa15.31■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF705FA8MVS1 300 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF705DP0CH99 300 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF705BP0CI00 300 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 RYR3Q15413 4870 aa15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 GUK1Q16774 197 aa15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 ZNF331Q9NQX6 463 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 GOLT1BQ9Y3E0 138 aa15.3■□□□□ 0.04
TRAPPC11-203ENST00000504526 CLINT1Q14677 625 aa15.29■□□□□ 0.04
TRAPPC11-203ENST00000504526 AMTNQ6UX39 209 aa15.29■□□□□ 0.04
TRAPPC11-203ENST00000504526 THAP6Q8TBB0 222 aa15.29■□□□□ 0.04
TRAPPC11-203ENST00000504526 RNF126Q9BV68 326 aa15.29■□□□□ 0.04
TRAPPC11-203ENST00000504526 ALG5Q9Y673 324 aa15.29■□□□□ 0.04
TRAPPC11-203ENST00000504526 TMEM189A5PLL7 270 aa15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 C11orf94C9JXX5 98 aa15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 IGLC2P0DOY2 106 aa15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 OR8A1Q8NGG7 326 aa15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 IGF2BP2-AS1Q96M15 143 aa15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 WDR61Q9GZS3 305 aaKnown RBP15.28■□□□□ 0.04
TRAPPC11-203ENST00000504526 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
TRAPPC11-203ENST00000504526 OR11H7Q8NGC8 314 aa15.27■□□□□ 0.04
TRAPPC11-203ENST00000504526 RPUSD4Q96CM3 377 aaKnown RBP15.27■□□□□ 0.04
TRAPPC11-203ENST00000504526 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
TRAPPC11-203ENST00000504526 IGHV3OR16-12A0A075B7B8 117 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 TRAV5A0A0B4J249 113 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 C17orf112F2Z3M2 114 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 ZNF253O75346 499 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 HIST1H1AQ02539 215 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 ATP5SQ99766 215 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 TMEM14CQ9P0S9 112 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 RFNGQ9Y644 331 aa15.26■□□□□ 0.03
TRAPPC11-203ENST00000504526 H3BQ15 152 aa15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 RPL12P30050 165 aaKnown RBP15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 RHOBP62745 196 aa15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 C1orf158Q8N1D5 194 aa15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 SAT2Q96F10 170 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 PPP1R14DQ9NXH3 145 aa15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 MBD2Q9UBB5 411 aa15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 DYNC2H1Q8NCM8 4307 aaKnown RBP15.25■□□□□ 0.03
TRAPPC11-203ENST00000504526 BOLA2-SMG1P6H3BVE0 249 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 INSP01308 110 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 HBE1P02100 147 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 SNRPCP09234 159 aaKnown RBP15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 TCTAP57738 103 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 C2CD4CQ8TF44 421 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 LINC00476Q8WZB0 136 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 TMEM208Q9BTX3 173 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 MED28Q9H204 178 aa15.24■□□□□ 0.03
TRAPPC11-203ENST00000504526 TEX48A0A1B0GUV7 120 aa15.23■□□□□ 0.03
TRAPPC11-203ENST00000504526 SLC17A3O00476 420 aa15.23■□□□□ 0.03
TRAPPC11-203ENST00000504526 IFNA5P01569 189 aa15.23■□□□□ 0.03
TRAPPC11-203ENST00000504526 HIST1H1EP10412 219 aaKnown RBP15.23■□□□□ 0.03
TRAPPC11-203ENST00000504526 SPINK13Q1W4C9 94 aa15.23■□□□□ 0.03
TRAPPC11-203ENST00000504526 TRAV10A0A0B4J240 114 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 H3BTX0 84 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 M0R2Z0 102 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 RRN3P1Q2M238 152 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 GCSAMLQ5JQS6 135 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 OR10J6PQ8NGY7 276 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 SCGB1C1Q8TD33 95 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 MRPL32Q9BYC8 188 aaKnown RBP15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 ZNF586Q9NXT0 402 aa15.22■□□□□ 0.03
TRAPPC11-203ENST00000504526 TRBV19A0A075B6N1 114 aa15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 CRXO43186 299 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 SPART-AS1P0CW21 52 aa15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 PDE6HQ13956 83 aa15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 Q6ZTC4 211 aa15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 MRPL53Q96EL3 112 aaKnown RBP15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 CELA1Q9UNI1 258 aa15.21■□□□□ 0.03
TRAPPC11-203ENST00000504526 TMEM256Q8N2U0 113 aa15.2■□□□□ 0.02
TRAPPC11-203ENST00000504526 ASB13Q8WXK3 278 aa15.2■□□□□ 0.02
TRAPPC11-203ENST00000504526 PARD6GQ9BYG4 376 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC11-203ENST00000504526 PRELID1Q9Y255 219 aa15.2■□□□□ 0.02
TRAPPC11-203ENST00000504526 TIMM9Q9Y5J7 89 aa15.2■□□□□ 0.02
TRAPPC11-203ENST00000504526 LOC102723971A0A1B0GUV8 181 aa15.19■□□□□ 0.02
TRAPPC11-203ENST00000504526 LY6G6CO95867 125 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms