RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TRBV20OR9-2A0A075B6H5 130 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 LOC102723996A0A087X1L8 192 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 SAA2-SAA4A0A096LPE2 208 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1-9A0A0C4DH69 117 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 C5orf63A6NC05 138 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 C12orf77C9JDV5 145 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM90A26D6RGX4 464 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 RHODO00212 210 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 NPIPB7O75200 414 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 MT-ND6P03923 174 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 IL4P05112 153 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 GLRXP35754 106 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 VDAC2P45880 294 aaPredicted RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 HERVK_113P61574 105 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 GNG5P63218 68 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 LCN2P80188 198 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 CFHR1Q03591 330 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM170BQ5T4T1 132 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 MIR17HGQ75NE6 70 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 TTC9CQ8N5M4 171 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 GRAMD2BQ96HH9 432 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 C16orf92Q96LL3 132 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 KIR2DL4Q99706 377 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 SMDT1Q9H4I9 107 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 SCRT2Q9NQ03 307 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 CISD1Q9NZ45 108 aaKnown RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 AKAP9Q99996 3911 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF561-AS1K7EIQ3 104 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 ANXA2RQ3ZCQ2 193 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 PET117Q6UWS5 81 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 C10orf35Q96D05 121 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM70Q9BUB7 260 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 SPRY4Q9C004 299 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 PRDM14Q9GZV8 571 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 MS4A5Q9H3V2 200 aa2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 FOXA2Q9Y261 457 aaPredicted RBP2.99□□□□□ -1.93
PCDH11X-208ENST00000504220 PYYP10082 97 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 COL8A2P25067 703 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 KIR2DS2P43631 304 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 WFDC2Q14508 124 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 TTC32Q5I0X7 151 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM166AQ6J272 317 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 EBLN2Q6P2I7 272 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CYP2G1PQ6ZSU1 146 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00305Q7Z4B0 112 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF645Q8N7E2 425 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 FAM216BQ8N7L0 139 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 OR4C13Q8NGP0 309 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 OR13A1Q8NGR1 328 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 OR10AG1Q8NH19 301 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00477Q96M19 166 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 PIMREGQ9BSJ6 248 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 NPCDR1Q9BY65 106 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 FBXL15Q9H469 300 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 TRAV12-3A0A0B4J271 114 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 A1L4Q6 167 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 C9orf118A6NHY6 69 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 HIGD1CA8MV81 97 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 C3orf79P0CE67 100 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF138P52744 262 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CDSNQ15517 529 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 LYRM7Q5U5X0 104 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 PCSK4Q6UW60 755 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 WDYHV1Q96HA8 205 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF714Q96N38 554 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 NHP2Q9NX24 153 aaKnown RBP2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 PHLDA3Q9Y5J5 127 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 FN1P02751 2386 aaKnown RBP2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 TMEM250H0YL14 139 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CD1AP06126 327 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 MYOD1P15172 320 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CCL3L1P16619 93 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 MFAP4P55083 255 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 CX3CL1P78423 397 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF726P1Q15940 193 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 C10orf55Q5SWW7 151 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ADAMTSL5Q6ZMM2 481 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF414Q96IQ9 312 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 SPCS1Q9Y6A9 102 aa2.98□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A0A6YYD4 124 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 LYNX1G3V0Z9 82 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 SNCGO76070 127 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 NDUFA3O95167 84 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 LYNX1P0DP58 116 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 NPPCP23582 126 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ATP5IP56385 69 aaPredicted RBP2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF324BQ6AW86 544 aaPredicted RBP2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF525Q8N782 197 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 OR13C6PQ8NH95 151 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 FGFBP3Q8TAT2 258 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC00527Q9UJ94 153 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 EPG5Q9HCE0 2579 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 NAV2Q8IVL1 2488 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ADAMTS20P59510 1910 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 TRAV5A0A0B4J249 113 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 A0A1W2PS18 150 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms