RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GABARAPH6UMI1 98 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 GABARAPO95166 117 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 ZNF680Q8NEM1 530 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 SLC35E1Q96K37 410 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 VGLL1Q99990 258 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 SCN3BQ9NY72 215 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 ANAPC10Q9UM13 185 aa8.12□□□□□ -1.11
LSM6-204ENST00000504181 TRDV1A0A1B0GX56 115 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 PGAM2P15259 253 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 PI3P19957 117 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 HLA-DMAP28067 261 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 SP6Q3SY56 376 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 AARDQ4LEZ3 155 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 NOXA1Q86UR1 476 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 TXNDC17Q9BRA2 123 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.11□□□□□ -1.11
LSM6-204ENST00000504181 TMEM56-RWDD3S4R434 201 aa8.11□□□□□ -1.11
LSM6-204ENST00000504181 A0A0A6YYH2 397 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 C3orf85A0A1B0GTC6 90 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 A6NJ64 397 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 ATP5HO75947 161 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 ORM2P19652 201 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 FAM219AQ8IW50 185 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 LRRC20Q8TCA0 184 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 TRGV9Q99603 122 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 RPH3ALQ9UNE2 315 aa8.1□□□□□ -1.11
LSM6-204ENST00000504181 IGKV1OR2-108A0A075B7D4 117 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 SFTA3P0C7M3 94 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 NAT1P18440 290 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 PPT1P50897 306 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 UCP3P55916 312 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 TCL1AP56279 114 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 PIGPP57054 158 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 RND3P61587 244 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 CD300CQ08708 224 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 LAGE3Q14657 143 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 LYSMD2Q8IV50 215 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 SLC25A31Q9H0C2 315 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 SLC45A2Q9UMX9 530 aa8.09□□□□□ -1.11
LSM6-204ENST00000504181 C9JCJ5 164 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 RGS10O43665 173 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 ORM1P02763 201 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 ZNF846Q147U1 533 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 OR10J3Q5JRS4 329 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 STEAP1BQ6NZ63 245 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 C10orf67Q8IYJ2 551 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 ZNF431Q8TF32 576 aaPredicted RBP8.08□□□□□ -1.12
LSM6-204ENST00000504181 TMEM147Q9BVK8 224 aa8.08□□□□□ -1.12
LSM6-204ENST00000504181 TRAV8-6A0A0B4J262 113 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 LINC00854A0A1B0GVQ3 168 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 MEF2DQ14814 521 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 TEPPQ6URK8 271 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 EIF4E3Q8N5X7 224 aaKnown RBP8.07□□□□□ -1.12
LSM6-204ENST00000504181 PACRGLQ8N7B6 248 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 Q8N976 141 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 HSD17B11Q8NBQ5 300 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 ZNF479Q96JC4 524 aa8.07□□□□□ -1.12
LSM6-204ENST00000504181 PRAC2D3DTV9 90 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 H3BRN7 92 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 CFDP00746 253 aaPredicted RBP8.06□□□□□ -1.12
LSM6-204ENST00000504181 RCVRNP35243 200 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 GPX4P36969 197 aaPredicted RBP8.06□□□□□ -1.12
LSM6-204ENST00000504181 LEPP41159 167 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 GGNBP1Q5YKI7 109 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 LGI3Q8N145 548 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 Q8N3U1 123 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 NHLRC2Q8NBF2 726 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 TXNL4BQ9NX01 149 aaKnown RBP8.06□□□□□ -1.12
LSM6-204ENST00000504181 TPRKBQ9Y3C4 175 aa8.06□□□□□ -1.12
LSM6-204ENST00000504181 A0A087X0K7 114 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 A0A0D9SG52 128 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 RNF222A6NCQ9 220 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 CRYM-AS1A6NIL9 109 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 CLEC2LP0C7M8 214 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 CT45A10P0DMU9 189 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 RPL7P18124 248 aaKnown RBP8.05□□□□□ -1.12
LSM6-204ENST00000504181 MXD1Q05195 221 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 TMEM182Q6ZP80 229 aaPredicted RBP8.05□□□□□ -1.12
LSM6-204ENST00000504181 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
LSM6-204ENST00000504181 BPIFCQ8NFQ6 507 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 ZNF486Q96H40 463 aaPredicted RBP8.05□□□□□ -1.12
LSM6-204ENST00000504181 DUSP21Q9H596 190 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 TP53TG3Q9ULZ0 132 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 U3KQ87 197 aa8.05□□□□□ -1.12
LSM6-204ENST00000504181 C7orf71A4D174 169 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
LSM6-204ENST00000504181 S100A7P31151 101 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 TIRAPP58753 221 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 LHFPL5Q8TAF8 219 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 C8orf4Q9NR00 106 aa8.04□□□□□ -1.12
LSM6-204ENST00000504181 TRAV8-3A0A0A6YYJ7 113 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 BTN1A1Q13410 526 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 IBA57Q5T440 356 aaKnown RBP8.03□□□□□ -1.12
LSM6-204ENST00000504181 PRSS48Q7RTY5 328 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms