RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 PVALBP20472 110 aaPredicted RBP8.54□□□□□ -1.04
MED28-203ENST00000503945 CAV2P51636 162 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 SLC38A11Q08AI6 406 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 ARL16Q0P5N6 197 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 OXA1LQ15070 435 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 PSG3Q16557 428 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 MZT2BQ6NZ67 158 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 LINC00305Q7Z4B0 112 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 ZNF546Q86UE3 836 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 FAM210BQ96KR6 192 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 C2orf50Q96LR7 162 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 CCDC32Q9BV29 185 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 DNAJC4Q9NNZ3 241 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
MED28-203ENST00000503945 LSM5Q9Y4Y9 91 aaKnown RBP8.54□□□□□ -1.04
MED28-203ENST00000503945 YTHDF2Q9Y5A9 579 aaKnown RBP8.54□□□□□ -1.04
MED28-203ENST00000503945 RYR1P21817 5038 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 A8MTW9 85 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 CCSO14618 274 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 COX7A2P2O60397 106 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 CXCL3P19876 107 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 SPINK13Q1W4C9 94 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 BPIFA4PQ86YQ2 179 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 OR11H7Q8NGC8 314 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 LINC01587Q99440 93 aa8.53□□□□□ -1.04
MED28-203ENST00000503945 A0A087X0K7 114 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 ZNF705GA8MUZ8 300 aaPredicted RBP8.52□□□□□ -1.05
MED28-203ENST00000503945 M0R2Z0 102 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 CST7O76096 145 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 INSP01308 110 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 HTN3P15516 51 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 S100A11P31949 105 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 CAMLGP49069 296 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 DAD1P61803 113 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
MED28-203ENST00000503945 C10orf113Q5VZT2 155 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 LINC00299Q6ZSB3 139 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 OR8A1Q8NGG7 326 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 S100ZQ8WXG8 99 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 RPUSD4Q96CM3 377 aaKnown RBP8.52□□□□□ -1.05
MED28-203ENST00000503945 SEC22CQ9BRL7 303 aa8.52□□□□□ -1.05
MED28-203ENST00000503945 FAT2Q9NYQ8 4349 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 FAM24AA6NFZ4 105 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 HTN1P15515 57 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 CXCL2P19875 107 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 LCN15Q6UWW0 184 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 NRARPQ7Z6K4 114 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 OR1L4Q8NGR5 311 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 TMEM37Q8WXS4 190 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 MGST2Q99735 147 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 UQCC1Q9NVA1 299 aa8.51□□□□□ -1.05
MED28-203ENST00000503945 TRAV12-2A0A075B6T6 113 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 BOLA2-SMG1P6H3BVE0 249 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 CRXO43186 299 aaPredicted RBP8.5□□□□□ -1.05
MED28-203ENST00000503945 PRM2P04554 102 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 SNRPCP09234 159 aaKnown RBP8.5□□□□□ -1.05
MED28-203ENST00000503945 SULT1A1P50225 295 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 S100A10P60903 97 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 HBG1P69891 147 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 HBG2P69892 147 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 TMEM256Q8N2U0 113 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 MUC4Q99102 2169 aa8.5□□□□□ -1.05
MED28-203ENST00000503945 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 MRPS12O15235 138 aaKnown RBP8.49□□□□□ -1.05
MED28-203ENST00000503945 RLN2P04090 185 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 TSPOP30536 169 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 CDKN1BP46527 198 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 TAS2R60P59551 318 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 GUK1Q16774 197 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 ATP6V1FQ16864 119 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 MIC13Q5XKP0 118 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 STX12Q86Y82 276 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 BAP18Q8IXM2 172 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 OR10J6PQ8NGY7 276 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 PFDN5Q99471 154 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 GPN1Q9HCN4 374 aaPredicted RBP8.49□□□□□ -1.05
MED28-203ENST00000503945 ZNF331Q9NQX6 463 aaPredicted RBP8.49□□□□□ -1.05
MED28-203ENST00000503945 PXMP4Q9Y6I8 212 aa8.49□□□□□ -1.05
MED28-203ENST00000503945 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
MED28-203ENST00000503945 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 AZU1P20160 251 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
MED28-203ENST00000503945 IL15RAQ13261 267 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 RAB32Q13637 225 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 RNF212Q495C1 297 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 LINC00336Q6ZUF6 198 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 TMEM252Q8N6L7 170 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 LYRM2Q9NU23 88 aaPredicted RBP8.48□□□□□ -1.05
MED28-203ENST00000503945 WDR83OSQ9Y284 106 aa8.48□□□□□ -1.05
MED28-203ENST00000503945 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
MED28-203ENST00000503945 M0R2N4 97 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms