RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SAV1Q9H4B6 383 aaPredicted RBP18.45■□□□□ 0.54
LSM6-202ENST00000502781 CYTL1Q9NRR1 136 aa18.45■□□□□ 0.54
LSM6-202ENST00000502781 BORCS7-ASMTA0A0B4J1R7 106 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 H3BMM0 161 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 HLA-DRB4P13762 266 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 M6PRP20645 277 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 DEFB1P60022 68 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 GUK1Q16774 197 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 GDF5OSQ5U4N7 250 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 IGFL4Q6B9Z1 124 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 Q6ZWC4 215 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 SLC50A1Q9BRV3 221 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 ZNF331Q9NQX6 463 aaPredicted RBP18.44■□□□□ 0.54
LSM6-202ENST00000502781 RPRMQ9NS64 109 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 HLA-DRB4X5D2U9 266 aa18.44■□□□□ 0.54
LSM6-202ENST00000502781 NBEAL2Q6ZNJ1 2754 aa18.43■□□□□ 0.54
LSM6-202ENST00000502781 RCHY1Q96PM5 261 aa18.43■□□□□ 0.54
LSM6-202ENST00000502781 ZNF586Q9NXT0 402 aa18.43■□□□□ 0.54
LSM6-202ENST00000502781 hCG_2014768A0A024R1R8 64 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 JTBO76095 146 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 SNRPCP09234 159 aaKnown RBP18.42■□□□□ 0.54
LSM6-202ENST00000502781 HIST1H1EP10412 219 aaKnown RBP18.42■□□□□ 0.54
LSM6-202ENST00000502781 SERF2P84101 59 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 ACOT6Q3I5F7 207 aaPredicted RBP18.42■□□□□ 0.54
LSM6-202ENST00000502781 RNF182Q8N6D2 247 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 SLC17A3O00476 420 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 ZNF253O75346 499 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 PYYP10082 97 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 RHOBP62745 196 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 LRRC20Q8TCA0 184 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 GNPNAT1Q96EK6 184 aaPredicted RBP18.42■□□□□ 0.54
LSM6-202ENST00000502781 CLUHP3Q96NS8 147 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 SH3BGRL3Q9H299 93 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 RETNQ9HD89 108 aa18.42■□□□□ 0.54
LSM6-202ENST00000502781 TRBV19A0A075B6N1 114 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 A0A0D9SG52 128 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 A0A0J9YX75 114 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 H3BTX0 84 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 GIG44P09565 113 aaPredicted RBP18.41■□□□□ 0.54
LSM6-202ENST00000502781 SPP1P10451 314 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 RAB2AP61019 212 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 PSG3Q16557 428 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 TP53TG1Q9Y2A0 90 aa18.41■□□□□ 0.54
LSM6-202ENST00000502781 F6UB75 175 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 HLA-DMBP28068 263 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 PDE6HQ13956 83 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 MORN3Q6PF18 240 aaPredicted RBP18.4■□□□□ 0.54
LSM6-202ENST00000502781 ZNF503Q96F45 646 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 OVOL2Q9BRP0 275 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 OR51M1Q9H341 326 aa18.4■□□□□ 0.54
LSM6-202ENST00000502781 A0A1B0GVG6 124 aa18.39■□□□□ 0.53
LSM6-202ENST00000502781 A8MTW9 85 aa18.39■□□□□ 0.53
LSM6-202ENST00000502781 ARPC5LQ9BPX5 153 aa18.39■□□□□ 0.53
LSM6-202ENST00000502781 CLEC5AQ9NY25 188 aa18.39■□□□□ 0.53
LSM6-202ENST00000502781 NDUFB4O95168 129 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 DEFB135Q30KP9 77 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 EBLN2Q6P2I7 272 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 AKAP14Q86UN6 197 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 RPP25LQ8N5L8 163 aaKnown RBP18.38■□□□□ 0.53
LSM6-202ENST00000502781 OR10G4Q8NGN3 311 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 OR10G9Q8NGN4 311 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 OR10G7Q8NGN6 311 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 RNF183Q96D59 192 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 FXYD5Q96DB9 178 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 PAXXQ9BUH6 204 aa18.38■□□□□ 0.53
LSM6-202ENST00000502781 CA1P00915 261 aaPredicted RBP18.37■□□□□ 0.53
LSM6-202ENST00000502781 MBP02144 154 aa18.37■□□□□ 0.53
LSM6-202ENST00000502781 C1QBP02746 253 aa18.37■□□□□ 0.53
LSM6-202ENST00000502781 TAS2R45P59539 299 aa18.37■□□□□ 0.53
LSM6-202ENST00000502781 ZNF738Q8NE65 137 aa18.37■□□□□ 0.53
LSM6-202ENST00000502781 NBEAP1P0C6P0 100 aa18.36■□□□□ 0.53
LSM6-202ENST00000502781 C4BPBP20851 252 aa18.36■□□□□ 0.53
LSM6-202ENST00000502781 KHDC3LQ587J8 217 aa18.36■□□□□ 0.53
LSM6-202ENST00000502781 TMEM41BQ5BJD5 291 aa18.36■□□□□ 0.53
LSM6-202ENST00000502781 RNF141Q8WVD5 230 aa18.36■□□□□ 0.53
LSM6-202ENST00000502781 A0A1W2PPV4 95 aa18.35■□□□□ 0.53
LSM6-202ENST00000502781 BCL2L11O43521 198 aa18.35■□□□□ 0.53
LSM6-202ENST00000502781 SPRY2O43597 315 aa18.35■□□□□ 0.53
LSM6-202ENST00000502781 OR7C2O60412 319 aa18.34■□□□□ 0.53
LSM6-202ENST00000502781 NUTF2P61970 127 aaKnown RBP18.34■□□□□ 0.53
LSM6-202ENST00000502781 FAM122CQ6P4D5 195 aa18.34■□□□□ 0.53
LSM6-202ENST00000502781 RPUSD4Q96CM3 377 aaKnown RBP18.34■□□□□ 0.53
LSM6-202ENST00000502781 EIF3GO75821 320 aaKnown RBP eCLIP18.33■□□□□ 0.53
LSM6-202ENST00000502781 OR10J4P0C629 311 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 CDC34P49427 236 aaPredicted RBP18.33■□□□□ 0.53
LSM6-202ENST00000502781 PSG9Q00887 426 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 AMTNQ6UX39 209 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 PQLC2Q6ZP29 291 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 OR4B1Q8NGF8 309 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 OR8A1Q8NGG7 326 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 BLNKQ8WV28 456 aa18.33■□□□□ 0.53
LSM6-202ENST00000502781 MRPL53Q96EL3 112 aaKnown RBP18.33■□□□□ 0.53
LSM6-202ENST00000502781 ZNF705FA8MVS1 300 aaPredicted RBP18.32■□□□□ 0.52
LSM6-202ENST00000502781 CNN1P51911 297 aaKnown RBP18.32■□□□□ 0.52
LSM6-202ENST00000502781 CD300CQ08708 224 aa18.32■□□□□ 0.52
LSM6-202ENST00000502781 TMUB2Q71RG4 321 aa18.32■□□□□ 0.52
LSM6-202ENST00000502781 CSNK1G2-AS1Q8NCQ2 148 aa18.32■□□□□ 0.52
LSM6-202ENST00000502781 HYLS1Q96M11 299 aa18.32■□□□□ 0.52
LSM6-202ENST00000502781 KANTRA0A1W2PQU2 76 aa18.31■□□□□ 0.52
LSM6-202ENST00000502781 DUSP14O95147 198 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms