RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CENPVL3A0A0U1RRI6 287 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 PRRG2O14669 202 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 PATE2Q6UY27 113 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 FAM168AQ92567 244 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 RNF114Q9Y508 228 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 LY96Q9Y6Y9 160 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 MED13LQ71F56 2210 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 ZNF705FA8MVS1 300 aaPredicted RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 IGLV2-23P01705 113 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 ZNF705DP0CH99 300 aaPredicted RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 ZNF705BP0CI00 300 aaPredicted RBP7.05□□□□□ -1.28
FN1-227ENST00000498719 TAS2R45P59539 299 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 BAGE3Q86Y29 109 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 BAGE2Q86Y30 109 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 OR4C13Q8NGP0 309 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 TBX15Q96SF7 602 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 ZNF355PQ9NSJ1 428 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 SERTAD4Q9NUC0 356 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 NAT8BQ9UHF3 227 aa7.05□□□□□ -1.28
FN1-227ENST00000498719 IGKV1D-37A0A075B6S9 117 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 OR11H12B2RN74 326 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 APOHP02749 345 aaPredicted RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 USF1P22415 310 aaPredicted RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 MEF2CQ06413 473 aaPredicted RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 PRR30Q53SZ7 412 aaPredicted RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 IBA57Q5T440 356 aaKnown RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 HCP5Q6MZN7 132 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 OR11H1Q8NG94 326 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 IGF2BP2-AS1Q96M15 143 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 C2orf88Q9BSF0 95 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
FN1-227ENST00000498719 GNB4Q9HAV0 340 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 TMEM106BQ9NUM4 274 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 Q9UF83 564 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 UFC1Q9Y3C8 167 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 ZFHX3Q15911 3703 aa7.04□□□□□ -1.28
FN1-227ENST00000498719 A0A1W2PPI3 338 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 MOSP00540 346 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 CNTFRP26992 372 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
FN1-227ENST00000498719 PPOXP50336 477 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TDGF1P3P51864 188 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TOMM20LQ6UXN7 152 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TMEM167AQ8TBQ9 72 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 ARL2-SNX15V9GYD0 113 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 WNK2Q9Y3S1 2297 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TRAV9-1A0A075B6T8 112 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 A0A1W2PRE2 83 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 NDUFB3O43676 98 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 GNG5P63218 68 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TMEM30BQ3MIR4 351 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 TMEM136Q6ZRR5 245 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 SAMD10Q9BYL1 202 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 MAP1LC3AQ9H492 121 aa7.03□□□□□ -1.28
FN1-227ENST00000498719 SPTBN1Q01082 2364 aaKnown RBP7.03□□□□□ -1.28
FN1-227ENST00000498719 LYNX1G3V0Z9 82 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 RHODO00212 210 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 TNFRSF13BO14836 293 aaPredicted RBP7.02□□□□□ -1.28
FN1-227ENST00000498719 NPSP0C0P6 89 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 LYNX1P0DP58 116 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 TPPP2P59282 170 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 LRRC10Q5BKY1 277 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 C1orf194Q5T5A4 169 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 TPTE2P1Q5T6R2 138 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 C10orf113Q5VZT2 155 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 PNKDQ8N490 385 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 VN1R17PQ8TDU5 208 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 DLX4Q92988 240 aaPredicted RBP7.02□□□□□ -1.28
FN1-227ENST00000498719 RNASE6Q93091 150 aaKnown RBP7.02□□□□□ -1.28
FN1-227ENST00000498719 PAXXQ9BUH6 204 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 C19orf24Q9BVV8 132 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 GNB1LQ9BYB4 327 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 OSTCQ9NRP0 149 aa7.02□□□□□ -1.28
FN1-227ENST00000498719 AMMECR1Q9Y4X0 333 aaPredicted RBP7.02□□□□□ -1.28
FN1-227ENST00000498719 ISLRO14498 428 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 FSTL3O95633 263 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 ORM2P19652 201 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 MFAP2P55001 183 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 DLX6P56179 175 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 GFRALQ6UXV0 394 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 LINC00305Q7Z4B0 112 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 PDPNQ86YL7 162 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 C11orf42Q8N5U0 333 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 BLNKQ8WV28 456 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 WASHC3Q9Y3C0 194 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 CACNA1BQ00975 2339 aa7.02□□□□□ -1.29
FN1-227ENST00000498719 TCRBV4S1A1TA0A5B7 111 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms