RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 IFNA5P01569 189 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 YPEL3P61236 119 aaPredicted RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 RHOGP84095 191 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 MEF2BQ02080 365 aaPredicted RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 MSMO1Q15800 293 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF709Q8N972 641 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 SMIM12Q96EX1 92 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 GPER1Q99527 375 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 RASL11BQ9BPW5 248 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 PSMG3Q9BT73 122 aaPredicted RBP4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 CST9LQ9H4G1 147 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 BET1LQ9NYM9 111 aa4.37□□□□□ -1.71
PAXBP1-209ENST00000497873 UBR5O95071 2799 aaPredicted RBP4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF407Q9C0G0 2248 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 C5orf63A6NC05 138 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 NBEAP1P0C6P0 100 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 CD99P14209 185 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 DTYMKP23919 212 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 PPP1CBP62140 327 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 LRRC10Q5BKY1 277 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 TIMM23BQ5SRD1 257 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 FAM78BQ5VT40 261 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 CALHM1Q8IU99 346 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 TNFRSF14Q92956 283 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM56Q96MV1 263 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 HDHD3Q9BSH5 251 aaPredicted RBP4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 VSIRQ9H7M9 311 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 MRPL27Q9P0M9 148 aaKnown RBP4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 MPC1Q9Y5U8 109 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM56-RWDD3S4R434 201 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 DOPEY2Q9Y3R5 2298 aa4.36□□□□□ -1.71
PAXBP1-209ENST00000497873 C3orf85A0A1B0GTC6 90 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF850A8MQ14 1090 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PMCHP20382 165 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 S100A7P31151 101 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 FXYD4P59646 89 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 SERF2P84101 59 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 KISS1Q15726 138 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 TBC1D28Q2M2D7 210 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 LDLRAD2Q5SZI1 272 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 C12orf54Q6X4T0 127 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 Q6ZVH6 145 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 C6orf201Q7Z4U5 140 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 MDP1Q86V88 176 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 DOLPP1Q86YN1 238 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 SELENOHQ8IZQ5 122 aaKnown RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 OR5A2Q8NGI9 324 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 OR11L1Q8NGX0 322 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 SCGB1C1Q8TD33 95 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 RSG1Q9BU20 258 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM222Q9H0R3 208 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PATZ1Q9HBE1 687 aaKnown RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 RBM7Q9Y580 266 aaKnown RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PCNX1Q96RV3 2341 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PTPN13Q12923 2485 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 IGHV2-26A0A0B4J1V2 119 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 IQCF6A8MYZ5 107 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 J3QKU1 62 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 NRASP01111 189 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 TSPOP30536 169 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 CFHR2P36980 270 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PSMB3P49720 205 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 ARF6P62330 175 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 Q0VG73 95 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 IGFBP7Q16270 282 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 FBXL19-AS1Q494R0 122 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 MRPL30Q8TCC3 161 aaKnown RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 TMEM101Q96IK0 257 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF286AQ9HBT8 521 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 PLEKHJ1Q9NW61 149 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF586Q9NXT0 402 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 USP9XQ93008 2570 aaPredicted RBP4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 GTF3C1Q12789 2109 aa4.35□□□□□ -1.71
PAXBP1-209ENST00000497873 IGLC7A0M8Q6 106 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 HSBP1O75506 76 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 MOSP00540 346 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 CRISP2P16562 243 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 DSCR10P59022 87 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 RPEL1Q2QD12 228 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 CEACAM21Q3KPI0 293 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 NMSQ5H8A3 153 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 BHLHA15Q7RTS1 189 aaPredicted RBP4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 LINC00596Q86U02 117 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 MYPOPQ86VE0 399 aaPredicted RBP4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 ZNF695Q8IW36 515 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 TCTEX1D1Q8N7M0 179 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 SIGLECL1Q8N7X8 197 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 ST6GALNAC3Q8NDV1 305 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 SAMD10Q9BYL1 202 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 ALPK2Q86TB3 2170 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 HECTD1Q9ULT8 2610 aa4.34□□□□□ -1.71
PAXBP1-209ENST00000497873 C5orf49A4QMS7 147 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms