RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 DEFB4AO15263 64 aa7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 CYCSP99999 105 aaKnown RBP7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 ZNF331Q9NQX6 463 aaPredicted RBP7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 KLK5Q9Y337 293 aaPredicted RBP7.82□□□□□ -1.16
SHROOM3-210ENST00000497440 C11orf94C9JXX5 98 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 E5RGE8 158 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 MPDU1O75352 247 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 SIX6O95475 246 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 OR5G3P0C626 314 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 CNN1P51911 297 aaKnown RBP7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 NHLH2Q02577 135 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 RAB31Q13636 194 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 PMS2P11Q13670 270 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 PSG3Q16557 428 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 C12orf74Q32Q52 190 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 LGALS9CQ6DKI2 356 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 EBLN2Q6P2I7 272 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 OR11H7Q8NGC8 314 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 IGF2BP2-AS1Q96M15 143 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 OR5AC2Q9NZP5 309 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 APLNQ9ULZ1 77 aa7.81□□□□□ -1.16
SHROOM3-210ENST00000497440 H3BQ15 152 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 ZNF253O75346 499 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 DUSP14O95147 198 aaKnown RBP7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 HLA-DMBP28068 263 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 BCAP31P51572 246 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 HBG1P69891 147 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 HBG2P69892 147 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 MIC13Q5XKP0 118 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 Q6ZRG5 221 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 STX12Q86Y82 276 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 BPIFA4PQ86YQ2 179 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 RNF182Q8N6D2 247 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 OR8A1Q8NGG7 326 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 PPP1R1CQ8WVI7 109 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 SLC39A9Q9NUM3 307 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 CELA1Q9UNI1 258 aa7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
SHROOM3-210ENST00000497440 PKHD1P08F94 4074 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 TMEM189A5PLL7 270 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 MPC2O95563 127 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 IGKV3-20P01619 116 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 AMBPP02760 352 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 DEFA1P59665 94 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 DEFA3P59666 94 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 BAXQ07812 192 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 OXA1LQ15070 435 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 C10orf113Q5VZT2 155 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 Q6ZTC4 211 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 OR4B1Q8NGF8 309 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 OR1L4Q8NGR5 311 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 C2CD4CQ8TF44 421 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 PFDN5Q99471 154 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
SHROOM3-210ENST00000497440 PKD1P98161 4303 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 TRAV5A0A0B4J249 113 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 RLN2P04090 185 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 TSPOP30536 169 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 S100A10P60903 97 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 GUK1Q16774 197 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 OR5C1Q8NGR4 320 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 FAM167A-AS1Q96KT0 104 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 NPCDR1Q9BY65 106 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 WDR61Q9GZS3 305 aaKnown RBP7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 ZNF586Q9NXT0 402 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 DKK2Q9UBU2 259 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 RFNGQ9Y644 331 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 PXMP4Q9Y6I8 212 aa7.78□□□□□ -1.16
SHROOM3-210ENST00000497440 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 SLC17A3O00476 420 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 NDUFB4O95168 129 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 FXYD7P58549 80 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 B2MP61769 119 aa7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 RPUSD4Q96CM3 377 aaKnown RBP7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
SHROOM3-210ENST00000497440 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 UBE2L5PA0A1B0GUS4 154 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 PRAC2D3DTV9 90 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 PTTG1O95997 202 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 PDE6HQ13956 83 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 GCSAMLQ5JQS6 135 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 ODF3Q96PU9 254 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 PARD6GQ9BYG4 376 aaPredicted RBP7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 GOLT1BQ9Y3E0 138 aa7.76□□□□□ -1.17
SHROOM3-210ENST00000497440 TEX48A0A1B0GUV7 120 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 BOLA2-SMG1P6H3BVE0 249 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 M0R2Z0 102 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 SPART-AS1P0CW21 52 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 FGF7P21781 194 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms