RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
PCBP4-216ENST00000497390 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
PCBP4-216ENST00000497390 OR4C46A6NHA9 309 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 H3BRN7 92 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 CHEK1O14757 476 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.35
PCBP4-216ENST00000497390 FOXE3Q13461 319 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.35
PCBP4-216ENST00000497390 RNF125Q96EQ8 232 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 SMIM12Q96EX1 92 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 TMUB1Q9BVT8 246 aa12.83□□□□□ -0.35
PCBP4-216ENST00000497390 HIVEP3Q5T1R4 2406 aa12.83□□□□□ -0.36
PCBP4-216ENST00000497390 HLA-DRB1P01911 266 aa12.83□□□□□ -0.36
PCBP4-216ENST00000497390 CT83Q5H943 113 aa12.83□□□□□ -0.36
PCBP4-216ENST00000497390 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.36
PCBP4-216ENST00000497390 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
PCBP4-216ENST00000497390 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
PCBP4-216ENST00000497390 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
PCBP4-216ENST00000497390 LINC00614P0C842 121 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 PAX2Q02962 417 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 NBR2O15453 112 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 ZNF414Q96IQ9 312 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
PCBP4-216ENST00000497390 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 LEPROTL1O95214 131 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 LIPFP07098 398 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 HTR1DP28221 377 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 FXYD7P58549 80 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 C16orf54Q6UWD8 224 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 BPIFA4PQ86YQ2 179 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 K7ENP7 123 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 CCL21O00585 134 aa12.81□□□□□ -0.36
PCBP4-216ENST00000497390 HLA-DMBP28068 263 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 LOXL1Q08397 574 aaPredicted RBP12.8□□□□□ -0.36
PCBP4-216ENST00000497390 LY6G5BQ8NDX9 201 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 ZFP30Q9Y2G7 519 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
PCBP4-216ENST00000497390 HAX1O00165 279 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 TCF21O43680 179 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 NDUFS7O75251 213 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
PCBP4-216ENST00000497390 KLHDC1Q8N7A1 406 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 C1RLQ9NZP8 487 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
PCBP4-216ENST00000497390 TMEM213A2RRL7 107 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 PSG3Q16557 428 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 NCBP2LA6PVI3 153 aaKnown RBP12.79□□□□□ -0.36
PCBP4-216ENST00000497390 GNG7O60262 68 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 NCR2O95944 276 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 GAGE1Q13065 139 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 Q8TAT8 98 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 NDFIP1Q9BT67 221 aa12.79□□□□□ -0.36
PCBP4-216ENST00000497390 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
PCBP4-216ENST00000497390 A0A1B0GUT8 65 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 OR2T8A6NH00 312 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 NBL1P41271 181 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 NEU4Q8WWR8 484 aaPredicted RBP12.78□□□□□ -0.36
PCBP4-216ENST00000497390 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
PCBP4-216ENST00000497390 FOSL1P15407 271 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
PCBP4-216ENST00000497390 CELSR2Q9HCU4 2923 aa12.77□□□□□ -0.36
PCBP4-216ENST00000497390 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.36
PCBP4-216ENST00000497390 TCTAP57738 103 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 C5orf64Q2M2E5 130 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 LOC389332A0A1B0GUA5 103 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 A0A1W2PPR1 153 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 CCL25O15444 150 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 NDUFA3O95167 84 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 ADORA2A-AS1P86434 159 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 OR11H6Q8NGC7 330 aa12.77□□□□□ -0.37
PCBP4-216ENST00000497390 CHCHD1Q96BP2 118 aaKnown RBP12.77□□□□□ -0.37
PCBP4-216ENST00000497390 SOX21Q9Y651 276 aaPredicted RBP12.77□□□□□ -0.37
PCBP4-216ENST00000497390 IGLV11-55A0A075B6I3 123 aa12.76□□□□□ -0.37
PCBP4-216ENST00000497390 SNAI2O43623 268 aa12.76□□□□□ -0.37
PCBP4-216ENST00000497390 ZFP36P26651 326 aaKnown RBP12.76□□□□□ -0.37
PCBP4-216ENST00000497390 MPV17L2Q567V2 206 aa12.76□□□□□ -0.37
PCBP4-216ENST00000497390 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
PCBP4-216ENST00000497390 CRYBG3Q68DQ2 2970 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 ODF3BA8MYP8 253 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 IFI27P40305 119 aaPredicted RBP12.75□□□□□ -0.37
PCBP4-216ENST00000497390 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
PCBP4-216ENST00000497390 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 NPBQ8NG41 125 aa12.75□□□□□ -0.37
PCBP4-216ENST00000497390 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 SMKR1H3BMG3 65 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 RNF5Q99942 180 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 VGLL1Q99990 258 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 A0A096LNJ9 63 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 VMO1Q7Z5L0 202 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 ZNF575Q86XF7 245 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 ARPC1AQ92747 370 aa12.74□□□□□ -0.37
PCBP4-216ENST00000497390 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms