RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FOXI2Q6ZQN5 318 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 BPIFA4PQ86YQ2 179 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 IL17DQ8TAD2 202 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 MUC7Q8TAX7 377 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 CLUHP3Q96NS8 147 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 WDR61Q9GZS3 305 aaKnown RBP8.41□□□□□ -1.06
HLA-B-254ENST00000497377 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 HLA-DRB4X5D2U9 266 aa8.41□□□□□ -1.06
HLA-B-254ENST00000497377 C17orf112F2Z3M2 114 aa8.4□□□□□ -1.06
HLA-B-254ENST00000497377 IFNA5P01569 189 aa8.4□□□□□ -1.06
HLA-B-254ENST00000497377 EBLN2Q6P2I7 272 aa8.4□□□□□ -1.06
HLA-B-254ENST00000497377 C1QTNF4Q9BXJ3 329 aa8.4□□□□□ -1.06
HLA-B-254ENST00000497377 PARD6GQ9BYG4 376 aaPredicted RBP8.4□□□□□ -1.06
HLA-B-254ENST00000497377 SAV1Q9H4B6 383 aaPredicted RBP8.4□□□□□ -1.06
HLA-B-254ENST00000497377 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
HLA-B-254ENST00000497377 GUK1Q16774 197 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 LCN15Q6UWW0 184 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 CLEC5AQ9NY25 188 aa8.39□□□□□ -1.07
HLA-B-254ENST00000497377 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
HLA-B-254ENST00000497377 LRRC20Q8TCA0 184 aa8.38□□□□□ -1.07
HLA-B-254ENST00000497377 AQP10Q96PS8 301 aa8.38□□□□□ -1.07
HLA-B-254ENST00000497377 HRH4Q9H3N8 390 aa8.38□□□□□ -1.07
HLA-B-254ENST00000497377 TRAV8-2A0A0B4J237 113 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 A0A0J9YX75 114 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
HLA-B-254ENST00000497377 GIG44P09565 113 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-254ENST00000497377 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 ZNF266Q14584 549 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 MORN5Q5VZ52 161 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 OR11H2Q8NH07 326 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 RARRES2Q99969 163 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 MRPL32Q9BYC8 188 aaKnown RBP8.37□□□□□ -1.07
HLA-B-254ENST00000497377 SMIM3Q9BZL3 60 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
HLA-B-254ENST00000497377 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
HLA-B-254ENST00000497377 A8MTW9 85 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 ZNF253O75346 499 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 C4BPBP20851 252 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 PSG3Q16557 428 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 GDF5OSQ5U4N7 250 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 FAM78BQ5VT40 261 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 INO80EQ8NBZ0 244 aaPredicted RBP8.36□□□□□ -1.07
HLA-B-254ENST00000497377 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 OR2T35Q8NGX2 323 aa8.36□□□□□ -1.07
HLA-B-254ENST00000497377 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 AMBPP02760 352 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
HLA-B-254ENST00000497377 PSG9Q00887 426 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 PDE6HQ13956 83 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 FFAR4Q5NUL3 377 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 RNF182Q8N6D2 247 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 SAT2Q96F10 170 aaPredicted RBP8.35□□□□□ -1.07
HLA-B-254ENST00000497377 C11orf68Q9H3H3 251 aaKnown RBP8.35□□□□□ -1.07
HLA-B-254ENST00000497377 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
HLA-B-254ENST00000497377 FXYD6-FXYD2A0A087WZ82 144 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 A0A0J9YWU9 116 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 ZNF705EA8MWA4 302 aaPredicted RBP8.34□□□□□ -1.07
HLA-B-254ENST00000497377 F6UB75 175 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 H3BQ15 152 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 MIFP14174 115 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 DEFB1P60022 68 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 Q5BKY6 102 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 IGFL4Q6B9Z1 124 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
HLA-B-254ENST00000497377 WFDC1Q9HC57 220 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 TNFSF18Q9UNG2 199 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 FUT9Q9Y231 359 aa8.34□□□□□ -1.07
HLA-B-254ENST00000497377 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
HLA-B-254ENST00000497377 TAS2R45P59539 299 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 RHOBP62745 196 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
HLA-B-254ENST00000497377 MIR17HGQ75NE6 70 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 OR8A1Q8NGG7 326 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
HLA-B-254ENST00000497377 FAM167A-AS1Q96KT0 104 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 SLC25A2Q9BXI2 301 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 KRTAP9-9Q9BYP9 154 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 KRTAP9-4Q9BYQ2 154 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 ZNF586Q9NXT0 402 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 PRELID1Q9Y255 219 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
HLA-B-254ENST00000497377 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
HLA-B-254ENST00000497377 SLC17A3O00476 420 aa8.32□□□□□ -1.08
HLA-B-254ENST00000497377 M6PRP20645 277 aa8.32□□□□□ -1.08
HLA-B-254ENST00000497377 HLA-DMBP28068 263 aa8.32□□□□□ -1.08
HLA-B-254ENST00000497377 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms