RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ENKURQ8TC29 256 aa11.88□□□□□ -0.51
TRAPPC3-207ENST00000497251 PKD1P98161 4303 aa11.88□□□□□ -0.51
TRAPPC3-207ENST00000497251 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
TRAPPC3-207ENST00000497251 CCL18P55774 89 aa11.87□□□□□ -0.51
TRAPPC3-207ENST00000497251 RAP2BP61225 183 aa11.87□□□□□ -0.51
TRAPPC3-207ENST00000497251 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
TRAPPC3-207ENST00000497251 SMCO3A2RU48 225 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 C5orf51A6NDU8 294 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 CBY3A6NI87 242 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 CRXO43186 299 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 ATP5G1P05496 136 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 METTL15P1P0C7V9 234 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 ATP5G3P48201 142 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 TAS2R60P59551 318 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 PLP1P60201 277 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 ZNF493Q6ZR52 646 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 C17orf77Q96MU5 243 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 GPN1Q9HCN4 374 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 NPVFQ9HCQ7 196 aa11.86□□□□□ -0.51
TRAPPC3-207ENST00000497251 NBDYA0A0U1RRE5 68 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 BOLA2-SMG1P6H3BVE0 249 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 L7N2F9 121 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 HYPMO75409 117 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 CDK2AP2O75956 126 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 VAMP2P63027 116 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 IFITM3Q01628 133 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 MGAT4CQ9UBM8 478 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
TRAPPC3-207ENST00000497251 A0A087X0K7 114 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 H3BRN7 92 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 K7EPK0 472 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 PRAF2O60831 178 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 CCNKO75909 580 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 DEFB130BP0DP73 79 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 DEFB130AP0DP74 79 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 PXDC1Q5TGL8 231 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 CYP2G1PQ6ZSU1 146 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 C6orf223Q8N319 242 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 ZNF738Q8NE65 137 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 C20orf144Q9BQM9 153 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 PPP1R14DQ9NXH3 145 aa11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC3-207ENST00000497251 F5H768 121 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 M0R2Z0 102 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 CXCL2P19875 107 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 PVALBP20472 110 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 DEFA1P59665 94 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 DEFA3P59666 94 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 IL15RAQ13261 267 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 TEPPQ6URK8 271 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 TMEM182Q6ZP80 229 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 NRARPQ7Z6K4 114 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 OR8A1Q8NGG7 326 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 ZNF503Q96F45 646 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 LINC01587Q99440 93 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 C11orf1Q9H5F2 150 aa11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-207ENST00000497251 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 FGL1Q08830 312 aa11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 PSG3Q16557 428 aa11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 LRRC20Q8TCA0 184 aa11.82□□□□□ -0.52
TRAPPC3-207ENST00000497251 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 NUDT3O95989 172 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 CXCL3P19876 107 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 CDKN1BP46527 198 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 CAV2P51636 162 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 RHOBP62745 196 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 MARVELD1Q9BSK0 173 aa11.81□□□□□ -0.52
TRAPPC3-207ENST00000497251 INMT-MINDY4F8WBC2 141 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 H7BYZ3 331 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 LINC00869P0C866 280 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 BCAP31P51572 246 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 CLINT1Q14677 625 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 ZNF546Q86UE3 836 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 BAP18Q8IXM2 172 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 LYRM2Q9NU23 88 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-207ENST00000497251 OR5G3P0C626 314 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 AZU1P20160 251 aa11.79□□□□□ -0.52
TRAPPC3-207ENST00000497251 S100A10P60903 97 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms