RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 FGL1Q08830 312 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 GCSAMLQ5JQS6 135 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 Q6ZRG5 221 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 HSPB11Q9Y547 144 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 DNAH1Q9P2D7 4330 aa11.67□□□□□ -0.54
DNMT3A-215ENST00000496570 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 H3BQ15 152 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 SLC17A3O00476 420 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 BPIFA4PQ86YQ2 179 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 OR4B1Q8NGF8 309 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 OR1L4Q8NGR5 311 aa11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-215ENST00000496570 H3BTX0 84 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 PET100P0DJ07 73 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 RPL12P30050 165 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 NUTF2P61970 127 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 PSG9Q00887 426 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 SAT2Q96F10 170 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 PFDN5Q99471 154 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 C1QTNF4Q9BXJ3 329 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 RNF24Q9Y225 148 aa11.65□□□□□ -0.54
DNMT3A-215ENST00000496570 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 ZNF705FA8MVS1 300 aaPredicted RBP11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 MIFP14174 115 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 CXCL2P19875 107 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 CNN1P51911 297 aaKnown RBP11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 PMS2P11Q13670 270 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 PSG3Q16557 428 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 ATP5SQ99766 215 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
DNMT3A-215ENST00000496570 LCE6AA0A183 80 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 OXA1LQ15070 435 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 Q5BKY6 102 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 ZNF738Q8NE65 137 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 MED28Q9H204 178 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
DNMT3A-215ENST00000496570 HYDINQ4G0P3 5121 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 CRXO43186 299 aaPredicted RBP11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 FAM167A-AS1Q96KT0 104 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 NEU1Q99519 415 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 MFFQ9GZY8 342 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 RFNGQ9Y644 331 aa11.62□□□□□ -0.55
DNMT3A-215ENST00000496570 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
DNMT3A-215ENST00000496570 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
DNMT3A-215ENST00000496570 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
DNMT3A-215ENST00000496570 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
DNMT3A-215ENST00000496570 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 M0R2Z0 102 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 NDUFB4O95168 129 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 PYYP10082 97 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 LRRC20Q8TCA0 184 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
DNMT3A-215ENST00000496570 NUPR2A6NF83 97 aa11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 GIPP09681 153 aaPredicted RBP11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 GUK1Q16774 197 aa11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
DNMT3A-215ENST00000496570 G3V3Q6 166 aa11.58□□□□□ -0.56
DNMT3A-215ENST00000496570 ZNF253O75346 499 aa11.58□□□□□ -0.56
DNMT3A-215ENST00000496570 HIST1H1EP10412 219 aaKnown RBP11.58□□□□□ -0.56
DNMT3A-215ENST00000496570 IGF2BP2-AS1Q96M15 143 aa11.58□□□□□ -0.56
DNMT3A-215ENST00000496570 AQP10Q96PS8 301 aa11.58□□□□□ -0.56
DNMT3A-215ENST00000496570 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 C17orf112F2Z3M2 114 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 BAP18Q8IXM2 172 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 ZNF503Q96F45 646 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
DNMT3A-215ENST00000496570 TRAV12-2A0A075B6T6 113 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 SMIM9A6NGZ8 99 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 IFNA5P01569 189 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 FFAR4Q5NUL3 377 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 FXYD5Q96DB9 178 aa11.56□□□□□ -0.56
DNMT3A-215ENST00000496570 MRPL32Q9BYC8 188 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms