RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 LY6LH3BQJ8 138 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 HAX1O00165 279 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 CCL25O15444 150 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 HTR1DP28221 377 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 FCGR2BP31994 310 aaPredicted RBP10.26□□□□□ -0.77
PTPN7-217ENST00000495688 ARF6P62330 175 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 KLRD1Q13241 179 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 ERASQ7Z444 233 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 BPIFA4PQ86YQ2 179 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 SCNM1Q9BWG6 230 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 AKAP6Q13023 2319 aa10.26□□□□□ -0.77
PTPN7-217ENST00000495688 MAP1AP78559 2803 aaPredicted RBP10.25□□□□□ -0.77
PTPN7-217ENST00000495688 COL12A1Q99715 3063 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 FAM231BA6NCW3 169 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 HLA-DRB1P01911 266 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 C8orf49Q96NF6 230 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 PSG8Q9UQ74 426 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 FAM90A27PA6NNH2 459 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 H3BRN7 92 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 ZNF672Q499Z4 452 aaPredicted RBP10.25□□□□□ -0.77
PTPN7-217ENST00000495688 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
PTPN7-217ENST00000495688 NEU4Q8WWR8 484 aaPredicted RBP10.25□□□□□ -0.77
PTPN7-217ENST00000495688 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 MUC21Q5SSG8 566 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 C20orf202A1L168 122 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
PTPN7-217ENST00000495688 IGHV3-23P01764 117 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 FAM106CPP0CH98 169 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 FAM106AQ4KMX7 169 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 ZNF414Q96IQ9 312 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 COX11Q9Y6N1 276 aa10.24□□□□□ -0.77
PTPN7-217ENST00000495688 COL6A6A6NMZ7 2263 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 HES1Q14469 280 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 PSG3Q16557 428 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 TMEM75Q8N9X5 138 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 NBR2O15453 112 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 LIPFP07098 398 aa10.23□□□□□ -0.77
PTPN7-217ENST00000495688 FOXE3Q13461 319 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 SVIPQ8NHG7 77 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 ORAOV1Q8WV07 137 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 CFHR4Q92496 578 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 MAP1LC3CQ9BXW4 147 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 GNG7O60262 68 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 CDSNQ15517 529 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
PTPN7-217ENST00000495688 IGHV3OR16-8A0A075B7F1 116 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 TMEM213A2RRL7 107 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 NDPQ00604 133 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 LOXL1Q08397 574 aaPredicted RBP10.21□□□□□ -0.77
PTPN7-217ENST00000495688 FANCD2OSQ96PS1 177 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 AP5S1Q9NUS5 200 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 C1RLQ9NZP8 487 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 DPM3Q9P2X0 92 aa10.21□□□□□ -0.77
PTPN7-217ENST00000495688 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 NCR2O95944 276 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 NUDT3O95989 172 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 FXYD7P58549 80 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 ZNF738Q8NE65 137 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 TMEM191AQ9H0A3 160 aa10.21□□□□□ -0.78
PTPN7-217ENST00000495688 IGKV2-40A0A087WW87 121 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-217ENST00000495688 WI2-2373I1.2A0A1W2PRP0 233 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 F8W735 103 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-217ENST00000495688 K7EQM0 130 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 SNAI2O43623 268 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 IGKV2D-40P01614 121 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-217ENST00000495688 OR5AL1P0C617 328 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 RIGQ13278 110 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 RNF5Q99942 180 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 VKORC1Q9BQB6 163 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 IGHV3-35A0A0C4DH35 117 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 IFI27P40305 119 aaPredicted RBP10.2□□□□□ -0.78
PTPN7-217ENST00000495688 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 LY6G5BQ8NDX9 201 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 DYNAPQ8N1N2 210 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 PRSS3P2Q8NHM4 247 aa10.2□□□□□ -0.78
PTPN7-217ENST00000495688 D6R8Y8 96 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 UBE2V1Q13404 147 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 C5orf64Q2M2E5 130 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 AMN1Q8IY45 258 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 Q8TAT8 98 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 ZNF747Q9BV97 191 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 A0A087X0K7 114 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 A0A096LNJ9 63 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 NCBP2LA6PVI3 153 aaKnown RBP10.19□□□□□ -0.78
PTPN7-217ENST00000495688 HSBP1L1C9JCN9 74 aa10.19□□□□□ -0.78
PTPN7-217ENST00000495688 TCTAP57738 103 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms