RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FNDC10F2Z333 226 aa15.48■□□□□ 0.07
HDDC3-203ENST00000494993 NUDT3O95989 172 aa15.48■□□□□ 0.07
HDDC3-203ENST00000494993 PATE2Q6UY27 113 aa15.48■□□□□ 0.07
HDDC3-203ENST00000494993 C16orf74Q96GX8 76 aa15.48■□□□□ 0.07
HDDC3-203ENST00000494993 ARL6Q9H0F7 186 aa15.48■□□□□ 0.07
HDDC3-203ENST00000494993 NBDYA0A0U1RRE5 68 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 CBY3A6NI87 242 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 K7EPK0 472 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 MRPS12O15235 138 aaKnown RBP15.47■□□□□ 0.07
HDDC3-203ENST00000494993 NDUFB6O95139 128 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 METTL15P1P0C7V9 234 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 SRRQ9GZT4 340 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 ARV1Q9H2C2 271 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 RNF24Q9Y225 148 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 HSPG2P98160 4391 aa15.47■□□□□ 0.07
HDDC3-203ENST00000494993 PRB4P10163 310 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-203ENST00000494993 HTN1P15515 57 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 CDKN1BP46527 198 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 TNP2Q05952 138 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 SLC38A11Q08AI6 406 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 TEPPQ6URK8 271 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 OR10P1Q8NGE3 313 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 RPUSD4Q96CM3 377 aaKnown RBP15.46■□□□□ 0.07
HDDC3-203ENST00000494993 MGAT4CQ9UBM8 478 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 FLVCR2Q9UPI3 526 aa15.46■□□□□ 0.07
HDDC3-203ENST00000494993 TIMM8BQ9Y5J9 83 aaPredicted RBP15.46■□□□□ 0.07
HDDC3-203ENST00000494993 NAP1L6A6NFF2 107 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 CCDC160A6NGH7 325 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 OR4E1P0C645 316 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 CXCL2P19875 107 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 ANXA7P20073 488 aaKnown RBP15.45■□□□□ 0.06
HDDC3-203ENST00000494993 CCL18P55774 89 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 SPANXN2Q5MJ10 180 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 C6orf223Q8N319 242 aa15.45■□□□□ 0.06
HDDC3-203ENST00000494993 SCGB1D2O95969 90 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 INPP1P49441 399 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 PXDC1Q5TGL8 231 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 LCN15Q6UWW0 184 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 ZNF493Q6ZR52 646 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 RNASE8Q8TDE3 154 aaKnown RBP15.44■□□□□ 0.06
HDDC3-203ENST00000494993 RNF141Q8WVD5 230 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 ZNF331Q9NQX6 463 aaPredicted RBP15.44■□□□□ 0.06
HDDC3-203ENST00000494993 LINC00588Q9Y4M8 146 aa15.44■□□□□ 0.06
HDDC3-203ENST00000494993 TSC22D2O75157 780 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 TAS2R30P59541 319 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 BAK1Q16611 211 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 IAH1Q2TAA2 248 aaPredicted RBP15.43■□□□□ 0.06
HDDC3-203ENST00000494993 ZNF546Q86UE3 836 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 TMEM263Q8WUH6 116 aaKnown RBP15.43■□□□□ 0.06
HDDC3-203ENST00000494993 SLC50A1Q9BRV3 221 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 NOP10Q9NPE3 64 aaKnown RBP15.43■□□□□ 0.06
HDDC3-203ENST00000494993 LRP1BQ9NZR2 4599 aa15.43■□□□□ 0.06
HDDC3-203ENST00000494993 GOSR2O14653 212 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 C4orf46Q504U0 113 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 TRIQKQ629K1 86 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 LINC00305Q7Z4B0 112 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 C20orf144Q9BQM9 153 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 KRTAP4-5Q9BYR2 181 aa15.42■□□□□ 0.06
HDDC3-203ENST00000494993 RCL1Q9Y2P8 373 aaKnown RBP15.42■□□□□ 0.06
HDDC3-203ENST00000494993 C16orf90A8MZG2 172 aa15.41■□□□□ 0.06
HDDC3-203ENST00000494993 H7BYZ3 331 aa15.41■□□□□ 0.06
HDDC3-203ENST00000494993 AGPAT2O15120 278 aa15.41■□□□□ 0.06
HDDC3-203ENST00000494993 SNRPCP09234 159 aaKnown RBP15.41■□□□□ 0.06
HDDC3-203ENST00000494993 ARL16Q0P5N6 197 aa15.41■□□□□ 0.06
HDDC3-203ENST00000494993 ZBTB8BQ8NAP8 495 aaPredicted RBP15.41■□□□□ 0.06
HDDC3-203ENST00000494993 CLINT1Q14677 625 aa15.4■□□□□ 0.06
HDDC3-203ENST00000494993 KIR3DS1Q14943 382 aa15.4■□□□□ 0.06
HDDC3-203ENST00000494993 BPIFA4PQ86YQ2 179 aa15.4■□□□□ 0.06
HDDC3-203ENST00000494993 BTCP35070 178 aa15.39■□□□□ 0.05
HDDC3-203ENST00000494993 SSX7Q7RTT5 188 aa15.39■□□□□ 0.05
HDDC3-203ENST00000494993 OR10J6PQ8NGY7 276 aa15.39■□□□□ 0.05
HDDC3-203ENST00000494993 GGACTQ9BVM4 153 aa15.39■□□□□ 0.05
HDDC3-203ENST00000494993 PARD6GQ9BYG4 376 aaPredicted RBP15.39■□□□□ 0.05
HDDC3-203ENST00000494993 RBM38Q9H0Z9 239 aaKnown RBP15.39■□□□□ 0.05
HDDC3-203ENST00000494993 GSKIPQ9P0R6 139 aa15.39■□□□□ 0.05
HDDC3-203ENST00000494993 LINC00854A0A1B0GVQ3 168 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 SLC17A3O00476 420 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 COX7A2P2O60397 106 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 GFI1BQ5VTD9 330 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 LINC00612Q8N6U2 182 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 TMEM37Q8WXS4 190 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 MGST2Q99735 147 aa15.38■□□□□ 0.05
HDDC3-203ENST00000494993 C7orf66A4D0T2 115 aa15.37■□□□□ 0.05
HDDC3-203ENST00000494993 PRAC2D3DTV9 90 aa15.37■□□□□ 0.05
HDDC3-203ENST00000494993 H3BTX0 84 aa15.37■□□□□ 0.05
HDDC3-203ENST00000494993 MBPP02686 304 aaPredicted RBP15.37■□□□□ 0.05
HDDC3-203ENST00000494993 MORN5Q5VZ52 161 aa15.37■□□□□ 0.05
HDDC3-203ENST00000494993 MITD1Q8WV92 249 aa15.37■□□□□ 0.05
HDDC3-203ENST00000494993 CENPXA8MT69 81 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 CDK2AP2O75956 126 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 IGLC2P0DOY2 106 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 OR5I1Q13606 314 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 OPCMLQ14982 345 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 C10orf113Q5VZT2 155 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 CCDC28AQ8IWP9 274 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 GNPNAT1Q96EK6 184 aaPredicted RBP15.36■□□□□ 0.05
HDDC3-203ENST00000494993 SDHCQ99643 169 aaPredicted RBP15.36■□□□□ 0.05
HDDC3-203ENST00000494993 PXMP4Q9Y6I8 212 aa15.36■□□□□ 0.05
HDDC3-203ENST00000494993 TRAV26-1A0A087WT03 109 aa15.35■□□□□ 0.05
HDDC3-203ENST00000494993 M6PRP20645 277 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms