RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF575Q86XF7 245 aa16.32■□□□□ 0.2
COL27A1-208ENST00000494780 CCNKO75909 580 aa16.31■□□□□ 0.2
COL27A1-208ENST00000494780 FCN2Q15485 313 aa16.31■□□□□ 0.2
COL27A1-208ENST00000494780 ARL6Q9H0F7 186 aa16.31■□□□□ 0.2
COL27A1-208ENST00000494780 METTL15P1P0C7V9 234 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 SPANXN2Q5MJ10 180 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 PXDC1Q5TGL8 231 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 TEPPQ6URK8 271 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 PATE2Q6UY27 113 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 OR10P1Q8NGE3 313 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 ZNRF2Q8NHG8 242 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 RPUSD4Q96CM3 377 aaKnown RBP16.3■□□□□ 0.2
COL27A1-208ENST00000494780 C16orf74Q96GX8 76 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 SRRQ9GZT4 340 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 ARV1Q9H2C2 271 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 MGAT4CQ9UBM8 478 aa16.3■□□□□ 0.2
COL27A1-208ENST00000494780 NBDYA0A0U1RRE5 68 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 CCDC160A6NGH7 325 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 MRPS12O15235 138 aaKnown RBP16.29■□□□□ 0.2
COL27A1-208ENST00000494780 NUDT3O95989 172 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 OR4E1P0C645 316 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 CXCL2P19875 107 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 ANXA7P20073 488 aaKnown RBP16.29■□□□□ 0.2
COL27A1-208ENST00000494780 CDKN1BP46527 198 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 INPP1P49441 399 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 FLVCR2Q9UPI3 526 aa16.29■□□□□ 0.2
COL27A1-208ENST00000494780 TIMM8BQ9Y5J9 83 aaPredicted RBP16.29■□□□□ 0.2
COL27A1-208ENST00000494780 TAS2R30P59541 319 aa16.28■□□□□ 0.2
COL27A1-208ENST00000494780 ZNF493Q6ZR52 646 aa16.28■□□□□ 0.2
COL27A1-208ENST00000494780 TSC22D2O75157 780 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 HTN1P15515 57 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 CCL18P55774 89 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 SLC38A11Q08AI6 406 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 TRIQKQ629K1 86 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 LCN15Q6UWW0 184 aa16.27■□□□□ 0.2
COL27A1-208ENST00000494780 GOSR2O14653 212 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 SCGB1D2O95969 90 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 BAK1Q16611 211 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 IAH1Q2TAA2 248 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-208ENST00000494780 C4orf46Q504U0 113 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 ZNF546Q86UE3 836 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 C6orf223Q8N319 242 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 TMEM263Q8WUH6 116 aaKnown RBP16.26■□□□□ 0.19
COL27A1-208ENST00000494780 C20orf144Q9BQM9 153 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 SLC50A1Q9BRV3 221 aa16.26■□□□□ 0.19
COL27A1-208ENST00000494780 ZNF331Q9NQX6 463 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-208ENST00000494780 H7BYZ3 331 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 TNP2Q05952 138 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 LINC00305Q7Z4B0 112 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 ZBTB8BQ8NAP8 495 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-208ENST00000494780 RNASE8Q8TDE3 154 aaKnown RBP16.25■□□□□ 0.19
COL27A1-208ENST00000494780 RNF141Q8WVD5 230 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 GGACTQ9BVM4 153 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 LINC00588Q9Y4M8 146 aa16.25■□□□□ 0.19
COL27A1-208ENST00000494780 PRB4P10163 310 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-208ENST00000494780 BPIFA4PQ86YQ2 179 aa16.24■□□□□ 0.19
COL27A1-208ENST00000494780 NOP10Q9NPE3 64 aaKnown RBP16.24■□□□□ 0.19
COL27A1-208ENST00000494780 RCL1Q9Y2P8 373 aaKnown RBP16.24■□□□□ 0.19
COL27A1-208ENST00000494780 RYR1P21817 5038 aa16.23■□□□□ 0.19
COL27A1-208ENST00000494780 AGPAT2O15120 278 aa16.23■□□□□ 0.19
COL27A1-208ENST00000494780 CLINT1Q14677 625 aa16.23■□□□□ 0.19
COL27A1-208ENST00000494780 OR10J6PQ8NGY7 276 aa16.23■□□□□ 0.19
COL27A1-208ENST00000494780 GSKIPQ9P0R6 139 aa16.23■□□□□ 0.19
COL27A1-208ENST00000494780 CENPXA8MT69 81 aa16.22■□□□□ 0.19
COL27A1-208ENST00000494780 ARL16Q0P5N6 197 aa16.22■□□□□ 0.19
COL27A1-208ENST00000494780 RBM38Q9H0Z9 239 aaKnown RBP16.22■□□□□ 0.19
COL27A1-208ENST00000494780 COX7A2P2O60397 106 aa16.21■□□□□ 0.19
COL27A1-208ENST00000494780 MITD1Q8WV92 249 aa16.21■□□□□ 0.19
COL27A1-208ENST00000494780 LINC00854A0A1B0GVQ3 168 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 C7orf66A4D0T2 115 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 C16orf90A8MZG2 172 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 ZNF701M0R085 212 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-208ENST00000494780 SNRPCP09234 159 aaKnown RBP16.2■□□□□ 0.18
COL27A1-208ENST00000494780 BTCP35070 178 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 CNPY1Q3B7I2 92 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 SSX7Q7RTT5 188 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 CCDC28AQ8IWP9 274 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 LINC00612Q8N6U2 182 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 TMEM37Q8WXS4 190 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 MGST2Q99735 147 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 PXMP4Q9Y6I8 212 aa16.2■□□□□ 0.18
COL27A1-208ENST00000494780 MBPP02686 304 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-208ENST00000494780 KIR3DS1Q14943 382 aa16.19■□□□□ 0.18
COL27A1-208ENST00000494780 GFI1BQ5VTD9 330 aa16.19■□□□□ 0.18
COL27A1-208ENST00000494780 C10orf113Q5VZT2 155 aa16.19■□□□□ 0.18
COL27A1-208ENST00000494780 ZNF503Q96F45 646 aa16.19■□□□□ 0.18
COL27A1-208ENST00000494780 PRAC2D3DTV9 90 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 SLC17A3O00476 420 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 IGLC2P0DOY2 106 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 OR5I1Q13606 314 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 OPCMLQ14982 345 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 GNPNAT1Q96EK6 184 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-208ENST00000494780 SDHCQ99643 169 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-208ENST00000494780 PARD6GQ9BYG4 376 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-208ENST00000494780 KRTAP4-5Q9BYR2 181 aa16.18■□□□□ 0.18
COL27A1-208ENST00000494780 H3BTX0 84 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 L7N2F9 121 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 CDK2AP2O75956 126 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 M6PRP20645 277 aa16.17■□□□□ 0.18
COL27A1-208ENST00000494780 VAMP2P63027 116 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms