RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 HBE1P02100 147 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 TCRBP04435 133 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 HTN3P15516 51 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 BCAP31P51572 246 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 SELENOTP62341 195 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 CNPY1Q3B7I2 92 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 SAMD13Q5VXD3 122 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 TEPPQ6URK8 271 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 ZNF738Q8NE65 137 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 SEC22CQ9BRL7 303 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 ARV1Q9H2C2 271 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 NDUFA13Q9P0J0 144 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 DKK2Q9UBU2 259 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
MSH5-218ENST00000494646 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 LOC102723971A0A1B0GUV8 181 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 TMEM189A5PLL7 270 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 C5orf51A6NDU8 294 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 FAM24AA6NFZ4 105 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 ZNF705GA8MUZ8 300 aaPredicted RBP6.84□□□□□ -1.31
MSH5-218ENST00000494646 L7N2F9 121 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 M0R2N4 97 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 AGPAT2O15120 278 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 TSC22D2O75157 780 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 DUSP14O95147 198 aaKnown RBP6.84□□□□□ -1.31
MSH5-218ENST00000494646 RPL7P18124 248 aaKnown RBP6.84□□□□□ -1.31
MSH5-218ENST00000494646 TAS2R30P59541 319 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 PLP1P60201 277 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 RHOBP62745 196 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 ZNF846Q147U1 533 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 RRN3P1Q2M238 152 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 AMTNQ6UX39 209 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 OR11H7Q8NGC8 314 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 NDUFAF3Q9BU61 184 aa6.84□□□□□ -1.31
MSH5-218ENST00000494646 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
MSH5-218ENST00000494646 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 A8MTW9 85 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 H3BTX0 84 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 K7EPK0 472 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 CRXO43186 299 aaPredicted RBP6.83□□□□□ -1.32
MSH5-218ENST00000494646 CST7O76096 145 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 AZU1P20160 251 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
MSH5-218ENST00000494646 PSG3Q16557 428 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 LINC00305Q7Z4B0 112 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 C12orf45Q8N5I9 185 aaPredicted RBP6.83□□□□□ -1.32
MSH5-218ENST00000494646 ZNF431Q8TF32 576 aaPredicted RBP6.83□□□□□ -1.32
MSH5-218ENST00000494646 NUDT15Q9NV35 164 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 PPP1R14DQ9NXH3 145 aa6.83□□□□□ -1.32
MSH5-218ENST00000494646 TRAV5A0A0B4J249 113 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 FAM240BA0A1B0GVZ2 78 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 FNDC10F2Z333 226 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 MRPS12O15235 138 aaKnown RBP6.82□□□□□ -1.32
MSH5-218ENST00000494646 COX7A2P2O60397 106 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 AMBPP02760 352 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 HTN1P15515 57 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 CXCL3P19876 107 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 CAV2P51636 162 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 FCN2Q15485 313 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 CT83Q5H943 113 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 MORN5Q5VZ52 161 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 NRARPQ7Z6K4 114 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 BAP18Q8IXM2 172 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 POM121L12Q8N7R1 296 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 TMEM37Q8WXS4 190 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 C2orf50Q96LR7 162 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 LINC01587Q99440 93 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 MGST2Q99735 147 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 CDIP1Q9H305 208 aa6.82□□□□□ -1.32
MSH5-218ENST00000494646 A0A087X0K7 114 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 INSP01308 110 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 P0DMU3 169 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 FAM231AP0DMU4 169 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 FAM231CP0DMU5 169 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 CAMLGP49069 296 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 S100A10P60903 97 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 DAD1P61803 113 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 PXDC1Q5TGL8 231 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 C10orf113Q5VZT2 155 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 RPUSD4Q96CM3 377 aaKnown RBP6.81□□□□□ -1.32
MSH5-218ENST00000494646 GGACTQ9BVM4 153 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 PARD6GQ9BYG4 376 aaPredicted RBP6.81□□□□□ -1.32
MSH5-218ENST00000494646 C11orf1Q9H5F2 150 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 DNAJC4Q9NNZ3 241 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 NACAE9PAV3 2078 aa6.81□□□□□ -1.32
MSH5-218ENST00000494646 IGLV2-18A0A075B6J9 118 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 SIX6O95475 246 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 RAB31Q13636 194 aa6.8□□□□□ -1.32
MSH5-218ENST00000494646 RAB32Q13637 225 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms